Nocardia farcinica IFM 10152: NFA_2060
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Entry
NFA_2060 CDS
T00207
Symbol
rfbC
Name
(GenBank) putative dTDP-6-deoxy-4-ketoglucose epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00521
Streptomycin biosynthesis
nfa00523
Polyketide sugar unit biosynthesis
nfa00541
O-Antigen nucleotide sugar biosynthesis
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
nfa01250
Biosynthesis of nucleotide sugars
Module
nfa_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NFA_2060 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NFA_2060 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NFA_2060 (rfbC)
Enzymes [BR:
nfa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NFA_2060 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BAD55048
NIH_Japan:
nfa2060
UniProt:
Q5Z3E3
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All DBs
Position
complement(215949..216497)
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AA seq
182 aa
AA seq
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MEIRELSIPGAWVVTPRVFHDERGSFAEAFKASEFEKATGRPMDLRQVNCSVSAAGVLRG
IHYTENPPGQAKYVTCVRGAFLDVVVDLRRGSPTYGRWDSVLLDDVDRRSVFVSEGLGHA
ILSLEDDSTVTYLCSLEYTPELDGEIDAFDPTLAIEWPRTGRDGRPLTYLRSPKDTAAPP
FS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggagatccgggagctctcgattccgggggcgtgggtggtcaccccgcgcgtgttccac
gacgagcggggcagcttcgccgaggcgttcaaggcctcggagttcgagaaggccaccggt
cggccgatggacctgcggcaggtgaactgctcggtgtcggcggccggggtgctgcgcggc
atccactacaccgagaacccgcccggtcaggccaagtatgtgacctgcgtgcgcggcgcc
ttcctggatgtggtggtcgacctgcgccgcggctcacccacctacggccgctgggacagc
gtgctgctcgacgacgtggaccgccgctcggtgttcgtgtccgagggcctcggccacgcc
atcctgtcgctggaggacgactccaccgtcacctatctgtgttcgctcgagtacaccccg
gagctggacggcgagatcgacgccttcgatccgaccctggccatcgagtggccgcgcacc
ggccgcgacggcagaccgctgacctacctgcgttcaccgaaagacactgccgccccgccc
ttctcctga
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