Nocardia farcinica IFM 10152: NFA_47230
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Entry
NFA_47230 CDS
T00207
Symbol
tag
Name
(GenBank) putative 3-methyladenine glycosylase
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NFA_47230 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfa03400
]
NFA_47230 (tag)
Enzymes [BR:
nfa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
NFA_47230 (tag)
DNA repair and recombination proteins [BR:
nfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NFA_47230 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
BAD59574
NIH_Japan:
nfa47230
UniProt:
Q5YQG7
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All DBs
Position
4934060..4934686
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AA seq
208 aa
AA seq
DB search
MTVDDGRIRCPWSLASELYRDYHDFEWGAPLRGVDAMFERVCLEAFQSGLAWITILRKRE
GFRRAFAGFAVERVAEFGPADVDRLLADPGIVRNRAKIDAAIANARATLALDVPLDELVW
SFAPPPRPRPRSLADVPATSAESVALAKELKRRGFRFVGPTTAYALMQATGMVDDHLADC
WVGSTAHRDATAITFRTQVSVPNGDREE
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcgacgacgggcgcatccgctgcccctggtcgctggcctccgagctctatcgc
gactaccacgacttcgagtggggtgccccgctgcgcggggtggacgcgatgttcgagcgg
gtgtgcctggaagcgttccagtcgggcctggcgtggatcaccatcctgcgcaagcgggag
ggtttccgccgcgcgttcgccggcttcgccgtcgagcgggtcgccgagttcggtcccgcc
gatgtggaccggctgctcgccgaccccggcatcgtgcgcaaccgcgccaagatcgacgcc
gcgatcgccaacgcccgtgcgacgctggcgctggacgtgcccctcgacgagctggtgtgg
tcgttcgcgccgccgccgcgcccgcggccgcgcagcctggccgacgtgcccgcgaccagt
gccgaatccgtcgctctggcaaaagaattgaagcggcgcggcttccggttcgtcggcccg
accaccgcatacgcgctgatgcaggcgaccggaatggtcgacgatcacctggccgactgc
tgggtcggcagcaccgcgcaccgcgacgccaccgcgatcacatttcgaactcaggtatcc
gtcccgaacggcgatagggaagaatag
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