Nocardia farcinica IFM 10152: PNF1_1080
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Entry
PNF1_1080 CDS
T00207
Name
(GenBank) hypothetical protein
Organism
nfa
Nocardia farcinica IFM 10152
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
ResIII
Methyltransf_25
Methyltransf_11
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
BAD60633
NIH_Japan:
pnf11080
UniProt:
Q5YMF8
LinkDB
All DBs
Position
pNF1:128519..134980
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AA seq
2153 aa
AA seq
DB search
MFTPVELATLRCKVEDEAYSYGGYNRPLEIFNPGTAPRYLTEGPLKSLSVGERFGPTWLL
VESYLRAHPDLYDETPSSVEARQAHRSAAAKSLTTEAAEHFRAGRLARARELVDQAELAN
PYETGTYDGIRSRIDRLAGIVDELGLSRPQERFDGLPGGKQAQVSVGDHSFSLEPRGGGR
WVVYPKTGGAEDQSTLAEPMPTSEVMPRIRAYLASLPDPQNPTPAAHAPSAATTAAAQRD
PGNPTTPGDAPAEPLPIVIEHTAEDTLVRNTDKNNLQLRQALHDAKFNWSRPQRFWYQRR
ATDFAVRTRRVGYLRASLTRLGLPFTETNPAREESTTLTAAGVAEAAAPESAHEQQTTAE
TQHDSTAESAAAAEVSPTASGTPTPPLSSPDVTGNTTTATPTSQTESPADRPAGTAEVRV
PERPTAPQVDVPRSTQRRIEANLAAARTLQLVEAESRPPTAAEREVLAKWTSWGAAPQIF
DAEREEFRSDAESLRALIGEEGWKQANRTVLNAHYTDPMIVRAMWDHLRALGFTGGQVLE
PGCGAGAFIGHAPEAASMTGIELDSTTARIAQVLYPHASIRVESFADTRLPEGHFDAAIG
NVPFSSARLHDPVHNAGEHTMHNHFILKSLALTKPGGVVAVVTSSFTMDNKNPAARREIA
AQADFLGAIRLPNGTHRRVAGTDVLTDILILRRRDGEARRLGGPFELAVTAELPLTRGQG
ETESVLVNEYFLNNPEMVLGELRAGTSVYGGLSVEVLDRGDLEQHLRAALARIAERALSE
GIAHQPRELASGERRAAAAAPGDPNEFPGHLRTTASGFEVLHTDGTYSELKVPSTQADEL
RALLDLRDTAVALLENEAASAEDSDEIEALRTRLNQRYDRYVERYGAINRCSWHPTGRVD
DAGEPVMSVRRPPVMRVFRDDPHAPVVLALEDYDATTDSAVKMAIMRQRVVAPRSPRLGA
DTAEDAVAICLDTHGKIDLPVIAGLLGVDDDEARVQCRGLIYPDPADNGRYVPAAEYLSG
NVRVKLDQAREAAAANPETYSDNVTALTAVIPPDLGPAEIDARLGAVWIEAPDVQAFLNE
ILNDDTITVEHTKAGEWKVTGGRRGILSTQEFGTSRVPAPKLAQALLRQAPIRVYDPDES
GEARIPNPTETEAANEKAEQLNERFSEWVWENPVRAARLSEEYNRRFNNLVLRNYEADGK
MLTLPGLSKVYTPRPHQRAAVARMIAEPNVGLFHAVGAGKTLEMAMGVMELKRLGLVNKP
AIMVPNSMLDQFAREFLQAYPQARILAAGTEDLAGEKRRQFVARAATGDWDAIILTRGSF
QRLEVSRETAHWYFDREIEPRRQYLAELMSGSAKRSVVKRIEDAILKSEEKLKKKLGGPT
DPGITFEQTGIDYIVVDELHDFKNLATDTQIESAAIAGSQRAQKLHMVVEYLRDKHNGRA
ITGATATPLANSITEAYVVQRYLRPDLLEGAGIRNFDEWAATFGKTKTELEMSVDGNSWN
LKTRLVGFRNVPELQRMFHVAADVKLPEDLNLPVPKLARRADGQRAPEVISVPATETQLE
YVRELGHRAQMVKSRAVDPTRDNMLKISSDGRAAALDLRLVKSLGLTPGTAEEQGSPTLT
TAEGAAIAGYLHSKSPSPSTARYVALFAQRGRHESQRQESQEIGEEEFGLKLEAAADWMF
EKWQAAKDQVYLGRDGQPHPRRGGLVVAFCDLGTPGEDWNAYDELKAKLIARGAPPELFA
YIHDAKNDKGKAALFTKARNGSIQFLFGSTSKMGVGVNIQDRMVAMLHVDCPWRPADIEQ
RDGRGIRQGNQNEEIAVGRVVTEGTFDARMWAAQARKAAMVNQFMKGSLTVREIDDIGDA
ALNANEALAIASGNPLVLEKAEIDIEVTKLERLRRAHQRSQSMLQIRIRDANDAIPKLEA
EIDAYTRAIEHRRPTKGDAFAAKVSGRFYDHRGDAGDALAARLLKLIEDPRAVWKEFEDH
GVAEIAGFTLDARNVPTGRAALVSVVFSDIGDDVYVTLDKATLQKGGTAVMLRLENAVNG
LDKRLEVATGRLETERTERERSELRLGKPFEHSERLDALRERQKEINKELLGSKETETEN
ASTDPAAAPGEAESIRSAAMHDAAAMVHQMGGAAVVSGANGITIISDRGGRAR
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccccggtcgagctggcaacgctgcgctgcaaggtcgaggacgaggcgtattcc
tacggtgggtacaaccgcccactggagattttcaaccccggcaccgcccctcgctacttg
accgaggggccgctcaagtcgttgtccgtcggggagcggttcggcccgacctggcttctg
gtggagtcctatctgcgcgcgcacccggacctctacgacgagacacccagttcggtagaa
gcccgccaggcgcaccgcagtgcggccgccaaatcgctgaccaccgaggccgccgagcac
ttccgggccggccgactcgcccgcgcgcgagaactcgtcgatcaggccgaactcgccaac
ccctacgagaccgggacatacgacggcatccgctcccgcatcgaccggctcgcaggcatc
gtcgacgaactcggtctctcacgaccgcaagagcggttcgacggactgcccgggggcaag
caggcacaggtcagcgtcggcgaccacagcttctccctcgagccccgtgggggcggccgt
tgggtcgtctatccgaaaaccggcggcgccgaagaccagtccacgctggcggaacccatg
ccgaccagcgaggtgatgccgcgcattcgggcctacctggccagtctcccagacccgcag
aatcccacaccagcagctcacgctcccagcgctgcgacgactgccgcagcccagcgcgac
ccgggcaatcccacgacccccggggatgccccggcggaaccgcttccgattgtcatcgag
cacaccgcggaggacacgctcgtccgcaacaccgacaagaacaacctccaactccggcag
gccctgcacgatgccaagttcaattggtcgcgccctcaacggttctggtaccagcgaagg
gcaacagatttcgcggtccgtacccgtcgggtcggctacctccgggcctcgctgacccgc
ctcgggttgcccttcacagagacgaatccggcgcgcgaagagtccaccaccctcacggca
gcaggcgtcgcagaggccgctgcccccgagagcgcgcacgagcagcaaacaaccgctgaa
acccaacatgattcgacggcggaatcggcggccgcggccgaggtttcaccgacggcgtcg
ggcacgcccacgccacctttatcgtcgcccgatgtcaccgggaacaccacgacggcgact
cctacctcccagaccgaatcacccgccgaccggcccgccggaactgccgaagtccgggtg
cccgaacgaccgacggctccgcaggtcgacgtgccacgatcgacccagcgccgcatcgag
gcgaacctggcagcggccaggacccttcagctggtggaggccgagagccgtccgccgacc
gccgccgagcgggaagtgctggcgaaatggacctcctggggtgctgctccccagatcttc
gacgctgagcgcgaagagttccgctcggacgccgagtcgctacgggcgctgatcggcgag
gaaggctggaaacaagccaaccgcacagtcctcaacgctcactacaccgatccgatgatc
gttcgggcgatgtgggaccaccttcgggcactcgggttcaccggtggacaggtactcgag
ccaggctgcggggcgggagcctttatcgggcacgccccggaggcggcatcgatgaccggc
atcgagctggactccaccacagcgcgcatcgcacaagtgctgtacccccacgccagcatc
cgcgtcgagtccttcgcggacacccgtctccccgaagggcacttcgacgctgcgatcgga
aacgtgccgttctcctcggcccgcctccacgacccggtccacaacgccggcgagcacacc
atgcacaaccacttcatcctcaagtcgttggcgctgaccaagcccggcggcgtggtggcg
gtggtgaccagctcgttcacgatggacaacaagaaccccgccgctcgccgcgaaatcgcg
gcgcaagcggacttcctgggtgcgatccggctgcccaacggcacgcaccgacgggtcgca
ggtaccgacgtactcaccgacatcctgatcctgcgccgccgcgacggcgaagcccgccga
ctcggcgggcccttcgagctcgccgtcaccgccgaactcccgctgacccggggacaaggg
gagacggaatctgtactggtcaacgagtacttcctcaacaatcccgagatggtgctcggc
gaactgcgggcgggcaccagcgtttacggcgggctctcggtcgaggtgctcgaccgcggc
gacctcgagcagcacctgcgcgccgcgctggctcgaatcgccgaacgcgccctgtccgag
ggcatagctcatcagcccagggaactggccagcggcgagcgccgggcagccgcagccgct
cccggcgatccgaacgagttccccggccatctgcgcaccacggcgagcggattcgaagta
ctgcacaccgacggcacctacagcgagctgaaggtgcccagcacccaagccgacgagctg
cgggcactgctcgacctgagagatactgcggttgccctcctggaaaacgaggccgcgagc
gccgaggactccgacgagatcgaggccctgcgcacgcgcctcaaccagcgctacgaccgc
tacgtcgagcgctacggagcgatcaaccgatgctcctggcatccgaccggccgtgtcgac
gacgccggggagccggtgatgtccgtacgccggccgccggtgatgcgagtgttccgcgac
gatccgcacgcgcccgtcgtgctggccctcgaggactacgacgccaccaccgacagcgcg
gtgaagatggccatcatgcgtcagcgcgtcgtcgcgccgcgtagtccgcgcctgggtgca
gacactgccgaggacgcggtggcgatctgcctggacacacacggcaagatcgatctgccg
gtcatcgcgggcctgctcggcgtcgacgacgacgaagcccgcgtccaatgccgtggtctc
atctaccccgaccccgccgacaacggccggtacgttccagctgcggaatacctctcgggg
aacgtgcgggtcaaactcgaccaggcccgcgaggcggccgcggcgaacccggagacctac
agcgacaacgtcaccgcgctgaccgcagtcatcccgcccgacctcggacccgccgagatc
gacgcccgcctcggcgcggtgtggatcgaagcgcccgacgtgcaggcgttcctcaacgag
atcctcaacgacgacacgatcaccgtcgagcacaccaaggcgggggagtggaaggtcacc
ggcggccgccgcggcatcctgtcgacccaggaattcggcacctcccgcgtaccggcgccc
aagctcgcccaggccctgctgcgacaggccccgatccgcgtctacgacccggacgagagc
ggtgaggcgcgcatccccaaccccaccgaaactgaagccgccaacgagaaggccgagcag
ctcaacgagcggttctccgaatgggtgtgggagaacccggtccgcgccgcccggctgagc
gaggaatacaaccggcgcttcaacaacctggtgctgcgcaactacgaggccgacggcaag
atgctcaccctgcccggcctgtccaaggtctacaccccgcgcccgcaccagcgcgccgcg
gtggctcgcatgatcgccgaaccgaacgtcggcctgttccacgccgtcggcgcaggcaag
acgttggaaatggcaatgggcgttatggagctcaaacgccttgggctggtgaacaaaccg
gccatcatggtgcccaattccatgctcgaccagttcgcccgcgaattcctccaggcatac
ccgcaggcgcgcatcctcgccgctggcaccgaggatctggccggggagaagcgacgacag
ttcgtcgcccgcgcggccactggcgactgggacgcgatcatcctgacacgcgggtccttc
cagcgcctcgaggtctcccgtgagaccgcgcactggtacttcgatcgtgaaatcgagccc
cgacgccagtacctggcggaactgatgtccggcagcgcgaaacgcagcgtcgtcaagcgc
atcgaagacgcgatcctcaagtccgaggagaagctgaagaagaagctcggcggccccacc
gatccgggcatcaccttcgagcagaccggcatcgactacatcgtggtcgacgagttgcac
gacttcaagaacctggctaccgacacccagatcgagtccgccgccattgcgggcagccag
cgggcacagaagctgcacatggtggtggagtacctgcgcgacaagcacaacggtcgcgcc
atcaccggcgccaccgccaccccgctggcgaactcgatcaccgaggcgtacgtcgtgcaa
cgctacctgcgcccggacctgctcgaaggggccggaatccgcaacttcgacgagtgggcg
gccaccttcggcaagaccaagaccgagctggagatgtcggtcgacggcaactcctggaac
ctcaagacccggctcgtgggcttccgcaatgttcctgagctgcaacgcatgttccacgtc
gccgccgacgtcaaactgcccgaggatctgaacctcccggtgcccaagctcgctcgccgc
gccgacggacaacgcgcaccggaggtcatctcggtgccagccaccgagacccagctcgag
tacgtccgcgaactcggacatcgcgcccagatggtgaagtcgcgggcggtcgacccgacc
cgcgacaacatgctcaaaatttcctccgacggccgcgccgcagcgctggatctccggctc
gtcaagtcactcggcctcacccctggcaccgcagaagagcaggggagccccacgctgacc
accgcagagggagccgccattgccggatacctccactcgaaatctccgagcccgtccaca
gcgaggtatgtcgcactgttcgcgcagcgaggccgccacgaatcgcagcgccaggaatca
caggagatcggcgaggaagagttcggcctcaagctcgaggcggcagcggactggatgttc
gagaagtggcaggccgccaaggaccaggtctacctcggccgtgacgggcagccccacccc
cgccgcggcggactcgtcgtcgcattctgcgatctgggcacccccggtgaggactggaac
gcctacgacgagctcaaagccaagctcatcgcccgaggcgctccgccggagctgttcgcc
tacatccacgacgcgaagaacgacaagggcaaagcggcgctgttcaccaaggcccgaaac
ggcagcatccagttcctgttcggttccacgtccaagatgggcgtcggcgtgaacatccag
gaccgcatggtcgccatgttgcacgtcgactgcccctggcggcccgccgacatcgagcaa
cgcgacggccgtggcatccgacagggcaaccagaacgaggagatcgcggtcggccgggtt
gtcaccgaaggtaccttcgacgccaggatgtgggcggcccaggcgcggaaggcggccatg
gtcaatcagttcatgaagggctcgctgaccgtccgcgagatcgacgacatcggcgacgcg
gcgctgaacgccaacgaggccctcgctatcgccagcggcaatccgctggtgctggagaag
gccgagatcgacatcgaggtcaccaaactcgaacgcctgcgccgcgcgcaccagcgcagc
cagtccatgctgcaaatccgcatccgtgacgccaacgacgcgatcccgaaactggaggcc
gagatcgacgcctacacccgggcgatcgagcaccgcagacccaccaagggcgacgcattc
gccgccaaggtcagcggacggttctacgaccatcgcggcgacgccggcgacgccctggcc
gcccggcttctcaagctgatcgaagacccccgggcggtgtggaaggagttcgaggaccac
ggagtggccgagatcgcaggcttcaccttggacgcccgcaacgtcccgaccggccgcgcc
gctctggtgtcggtggtgttctccgacatcggcgacgacgtctacgtcacgctcgacaag
gcgacgctccagaagggcgggaccgcggtaatgctccgcctggagaacgccgtcaacggc
ttggacaagcggctcgaggttgccaccgggcggctcgaaaccgagcgcacggaacgagag
cgctccgaactccgcctcggcaaaccgttcgagcacagcgaacggctggatgcgctccgg
gaacggcagaaggagatcaacaaagagctgctcggcagcaaggaaacggagaccgagaac
gcctccaccgatccggcggcggcgcccggcgaggccgaatccatccggtcggccgcaatg
cacgacgccgcagcgatggttcaccagatgggaggcgccgcagttgtcagcggcgccaac
gggatcacgatcatcagcgatcggggcggccgggctcggtga
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