Neodiprion fabricii: 124174512
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Entry
124174512 CDS
T08986
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124174512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfb03041
]
124174512
Enzymes [BR:
nfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124174512
Spliceosome [BR:
nfb03041
]
Complex A
U2 snRNP components
U2 related factors
124174512
Complex B
124174512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
124174512
NCBI-ProteinID:
XP_046409688
LinkDB
All DBs
Position
1:complement(33521147..33526588)
Genome browser
AA seq
1027 aa
AA seq
DB search
MVRSGEKERHYRRRSRSRSASPEKKRRRSRSRDREREKTRHKERRSRSRERERERGDRKE
RTDRERERDRKRGDSKEKRLTGSKSSRSGKDRSNRSRSRERKDKDKGDTEDLPFDHTKLD
KEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKSSILANLQLPMKKWSLEDDSD
EETPVILNSTKEIKEEGDIKEELEVIPEEIKIQEEEVDPLDAFMAEVQEEVRKVNKLDPN
RSKPTNNGTGTGNTQSGGVVIVTGVAKKQVAKQKGELIEQNQDGLEYSSEEEGENLHETA
AGIANKQKRELAKVDHAATEYQPFRKAFYVEVPEIARMTPEEVEVYKEELEGIRVKGKGC
PKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFL
LPMFRHILDQTPLVDGDGPIALIMTPTRELCMQIGRDSKRFTKSLGLSHVCVYGGTGISE
QIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIM
ENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQKFY
KLLEVLGHYQDKGSTIVFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTIMDFKA
GRTKLLVATSVAARGLDVKHLVLVLNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITPEQ
ERYAGDILRAHELAAVPVPEPLRQLWEGYKTRQAADGKKVHTGGGFSGKGFKFDESEAAL
ANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREISRPSVANISVPGQPVPS
ATDKLELARRAASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKIVAEQLAAKLN
TKLNYQPREEDLVEGEGEPGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAG
LTVRGTYITPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQSSGTHTGS
RGRYKVL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagcggtgaaaaggagaggcactaccgaaggaggtccaggtcccggtctgca
tcgccagagaagaaacggagaagatccaggagccgagaccgagaaagagaaaagactcgt
cacaaggaacgtcgaagccgatccagggaaagagagcgcgaaaggggcgataggaaggaa
cgtacggacagggaaagagaacgtgatagaaaacgtggcgacagtaaagaaaagcgtctt
acaggctcaaaatcctcgcgctcgggtaaagatcgatcgaacagatcacggtcacgagaa
cgtaaggacaaagacaaaggtgacactgaggatttgccatttgaccacacaaaattggat
aaggaggaggaacaaaaaaggctggagttggaaatgcaaaaacgacgtgaaagaatagaa
agatggcgtgccgaaagaaagaaaaaggaattagaagctaccaaaaaggatggaaaatcg
tctatcttagcaaaccttcagcttcctatgaaaaaatggtccctagaagacgacagcgat
gaagagactcccgtcatcctcaacagtaccaaagaaattaaggaagaaggagatatcaaa
gaagaactcgaggtgataccagaagaaattaaaatacaggaagaagaagttgatcctctc
gatgctttcatggctgaggttcaagaagaagtacgaaaagttaataaactagaccctaac
cgatcaaaaccgaccaataatggaacaggtactggaaacacacagagtggtggagtggtt
atagttactggtgtagctaaaaaacaggttgcaaagcagaagggagaattgatagaacag
aatcaggatggattggaatattctagtgaagaagaaggtgaaaaccttcacgaaactgct
gctggaatagccaataaacaaaaacgtgagctggccaaagttgatcacgcagcaacggaa
tatcaaccgttcagaaaagcgttttacgttgaagttcctgaaattgcaagaatgacgcct
gaagaagtagaagtatataaggaggagcttgagggaatccgtgtaaagggaaaaggttgt
ccaaagcctatcaaatcttgggcccaatgtggggtcacaaaaaaggagttggaagtatta
aaaaagctcggttatgaaaaacctacaccaatacaatgtcaagccattccagcgatcatg
tctggccgcgatttaatcggtattgcgaaaactggaagtggtaagacactagcctttctt
ttgccaatgttcaggcacatacttgatcaaactccgttggtggatggcgatggacctatt
gcgttgatcatgacaccaactagggaactctgcatgcaaattggccgagactcaaaaaga
tttacaaaatccttgggcctctctcatgtatgcgtatatggtggtaccggaatttcggaa
cagatagcagaactgaaaagaggtgcagaaatcattgtatgcacacctggtagaatgatt
gacatgctggctgccaacagtggacgtgtgactaatttgagaagagtgacttatgtcgtt
ttggacgaggctgacagaatgtttgatatgggttttgaaccgcaggtaatgcgaataatg
gaaaatgtcaggccagaccgccaaacagtcctcttcagtgctacattccctcggcaaatg
gaggccttagctagacggatacttactcgtcccgtagaagttcaagtgggtggtcgttct
gtggtatgtaaagacgttgaacagcacgtcgtagttcttgaagaggatcaaaagttctat
aagcttctcgaagtgctgggacattatcaggataaaggctctacaatagtttttgtggac
aagcaagagaatgcggatacactgttgaaagacctaatgaaagcttcgtactcatgcatg
tctctacatggtggaattgatcagtgcgatcgagattctactattatggattttaaagct
ggtagaacgaaattgttggttgccacttcagttgcagccagaggacttgatgtaaaacat
ctcgttcttgtcctgaactatgactgtccaaatcattatgaagattacgttcatagatgt
gggagaactggacgtgctggaaacaagggatatgcttacacgtttatcacacctgaacaa
gaaagatatgcgggtgatattctacgtgctcatgaattagcagctgtaccagttccggaa
ccgttgcgtcaactttgggaaggttacaaaactcgtcaggcagctgacggtaagaaagta
cacaccggaggaggtttcagcgggaaaggtttcaagtttgatgaatcagaggcagctctg
gcgaatgaaaagaagaaattccaaaaagctgcgctaggtttgcaagactccgatgatgaa
gacattgaaaatgacattgatcagcagatcgaaagtatgttagcaccaaagcgaactgtt
cgcgaaatttccaggccatccgtggcaaatatttctgttcctggacaacctgtaccaagt
gctacagacaaattagaacttgcgaggagagccgcatctaaaattaacattgccaaaaat
ctgggtgctgaggcaaagggggcaactcaacaagctgcagaagctattctcaagggtgca
ggtcctacaaaccttatcaccgccaagatagtagctgagcaactcgctgcaaagttgaat
acgaaactgaactaccaaccgagagaagaagatcttgtcgaaggggagggtgaacctggt
gaacagactttccgaaaatatgaagaagagcttgagatcaatgactttccgcaacaagcg
aggtggcgcgttacaagcaaagaagctctcgctcaaatttcggaatattcagaagccgga
ctcactgttcgagggacatatatcacaccaggaaaagctccgccggaaggtgaaaggaag
ttataccttgcaattgaatcgaccagcgaattggctgtcagtaaagcaaaggcggaggta
tcccgacttattaaagaagaactcattaaactccagtcgtcgggaacgcacacaggatcg
cggggacgatataaagttttataa
DBGET
integrated database retrieval system
