Neodiprion fabricii: 124176302
Help
Entry
124176302 CDS
T08986
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfb01002
]
124176302
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfb04121
]
124176302
Enzymes [BR:
nfb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124176302
Peptidases and inhibitors [BR:
nfb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124176302
Ubiquitin system [BR:
nfb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124176302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
124176302
NCBI-ProteinID:
XP_046413365
LinkDB
All DBs
Position
2:complement(10406510..10419413)
Genome browser
AA seq
1295 aa
AA seq
DB search
MTVDFDAMVCAVEDCGVECVVRDCTSRDAQPKFKLSLHPSTTVIDIFNYVAQHYSYDVDS
FELVLQSARGEVVELNEVKEKNLMEIGLNFSNETKYTLVVSDVSRHASKDAAANRTISSI
KTPLFSPSSGDYNRPAPAFQSQIQEFTFNHKSVIKPETSYVGLVNQAMTCYLNSLLQALY
MTPEFRNALYNWEYVDGSEKDEAKSIPYQLQKLFLNLQTSTKPAVETTSLTKSFGWDSTE
AWQQHDIQELCRVMFDALEQKFKNTQQADLINRLYEGKMIDYVKCLECSTEKSREDTFLD
IPLPVRPFGSNVAYNSVEEALRAFVQPETLDGTNQYHCEKCNKKCNAHKGLKFSKFPYLL
TLHLKRFDFDYNTLHRIKLNDKVTFPDVLNLNSFVASTSAHESPGREEDTGVGVKCDDSS
TTDSGTLDDECPPCDNSSASTNQSTNHDQDDDEGIDVSNGPSTSSCSNHNHENEKNSGNR
AIDKGPYQYELFSIMIHSGSASGGHYYAYIKDLMTQEWFCFNDQSVTRITYDDIQKTYGG
GPTRAYYSGAYSSSTNAYMLMYRQIDPHRNKLPMQAVNFPKHIQDLLKKMKESEENDRKN
REKQMSMCKLKVYCHHPEEGRLTDAKLYVLQDETLQETTEVAHRRLGLEGIVKLDQCRLV
SYDHNEDLIERSWEGSELMEPIGDIWRNNSRFDLLLQIRRKDEQFETYLPGGVATKVFVV
DIDKEEVVDGPISVRGLLTQTIREYKLELSKLLKLDAKQIKLVLQKYPSDSRLLDKDDNM
LQSEGFYGPNKIFVATALDTDETKPFHESKLQKIIENFEYIISLRVLLPDTSKETLDDLN
IPSLEETRKGQEKSIANGPIKSSLGDMMKTMMTKNSEQTKPSCGIEETPPKTNTSAQLGE
GEDWNTPEQSNSEDSSLSDSERTLMGDVPDYTNCVEPQFPNSGIVFDYAPPKLTRMENWD
IDDESDYYFKAIPHSEDSQKLLKVLVDKRMQLSTLKKDLEPLVGVPVEYFKVFRHSSDSG
ETECSRLTEQLSCYQDGERLSVKLGRALRSGEFKVKLFQLLIHSTEPFKFLCDWIVSNEM
TVGQAKKEILAEIKRKYNIDIPYEKCRLRRKNYKTASKVCLDEEKFEVLRLYTQCELFVQ
ELPDKETVKDYNQVVLFVRKWSPSQMQLTPFEEITMNGKSIEELKEKLSSISDIPAQYIE
VAKGRNAFPCDISVLQVQSELNWNHQATTIDTLPLNLEDGSVVYFRDSREEPKQLSSEEL
KEIASKESSRLTSLSSTSSYSPRRERALKIYLDTK
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggattttgatgctatggtgtgtgccgtcgaagactgtggtgtggagtgcgta
gttcgtgattgcacttcacgagatgcccagccaaagtttaagctttctcttcacccatcg
acgacagttattgatatcttcaactatgtagctcaacattattcctacgatgtggacagc
tttgagctggtgctacaaagtgcacgtggtgaagtggtcgagctaaacgaagtaaaggaa
aaaaacctgatggaaattggattgaattttagtaacgagacaaagtacacactggtcgtg
agtgacgtttctcgccacgcttcaaaggatgcagcggccaacagaactatttcatccatc
aagactccactgtttagtccatcctctggagattacaaccgaccagctccagcattccag
tcacaaatccaggagttcacttttaatcataaaagtgtcatcaagcctgagactagttac
gtcggtctggtgaatcaggcaatgacgtgttacctaaacagccttttgcaagccctctac
atgaccccagagtttaggaatgctttgtacaactgggaatacgtcgatggttcagagaaa
gatgaggccaaaagtattccatatcaactgcagaaattatttctaaatttgcagacgtca
acaaagcctgcagtggagactacttctttaacgaaaagctttggttgggactcaacggaa
gcatggcaacagcacgatatacaagagttgtgccgagtgatgtttgatgccctggaacag
aagtttaaaaacacacagcaggctgacctgatcaataggctttacgaaggaaagatgatc
gactatgtaaagtgcctagaatgtagtactgaaaagtctagagaggatacttttctggac
attcctttacctgttcggccattcggcagcaatgtcgcgtacaatagcgtggaggaagcc
ttgcgagcgtttgtgcaacctgaaacactggacgggacaaatcagtatcattgtgaaaag
tgtaacaaaaaatgtaacgcacataaggggttgaaattttcaaaatttccgtaccttctt
acattacatttgaagcgatttgactttgactacaatactctccacagaatcaagctgaat
gataaggtaacgtttcccgatgttttaaatctcaattcctttgtcgcatcaacatctgct
cacgagtctccaggtagagaggaggacactggcgttggagtaaagtgtgatgatagttca
acgacagacagtggaacattagacgacgaatgtcccccgtgtgataacagcagtgcaagt
actaatcaatctacaaatcacgatcaagatgatgatgaaggtatagatgtaagcaatgga
ccctcaacctcaagttgcagcaatcacaatcatgaaaatgaaaagaattctggaaatcgt
gcaattgataaaggtccatatcagtacgaactcttctccatcatgattcacagtgggagt
gcaagcgggggtcattactacgcgtatatcaaagatctcatgactcaagaatggttttgc
tttaatgatcagagtgtcacgaggataacttatgacgatattcaaaagacatatggtggt
ggacctactcgagcttattatagtggagcatacagcagcagtacaaatgcttatatgctt
atgtatagacaaatagatccacatcgtaacaagctgccgatgcaagcagtaaactttccc
aaacacatacaggatcttttgaagaaaatgaaagaaagtgaagaaaacgaccgaaagaac
agagaaaaacagatgtctatgtgcaagcttaaagtgtattgtcatcacccggaagagggc
aggctcacagatgcaaaactttacgtattgcaagatgaaacgttacaagaaacgacagag
gtggctcacagaaggcttggtttagaaggaatagtaaagctagatcaatgtcgattagtt
agttacgatcataacgaagatttgatcgaacgaagctgggaaggatccgagttgatggaa
ccgatcggtgacatttggcgtaataacagccggttcgatctcctgcttcaaatacgtcgg
aaggacgagcagtttgagacttatttgccaggaggtgttgcaacgaaagtatttgttgtt
gatattgataaagaagaagttgttgacggtccgataagtgtgcgaggtttattaactcag
accatcagagaatacaaactcgagttgtcaaaactgttaaaattggatgccaagcagata
aaattagtcctacaaaaatatccttcagacagccggttgctagataaagatgacaatatg
cttcaatctgagggattttatggtccgaataaaattttcgttgccacagctttggacaca
gacgaaacgaaacctttccacgaatctaaactccaaaagattattgaaaatttcgagtac
atcatctcccttcgcgtattgttacctgacacaagcaaagaaacattagacgatttgaat
attccatccctcgaggagacacgcaaggggcaagaaaaatcgatagcgaatggtccgata
aaatcatctcttggtgacatgatgaagacgatgatgacaaagaacagcgaacaaaccaaa
cccagttgcggaatcgaggaaacacctccgaagactaatacctctgcgcagcttggagag
ggcgaagattggaatacacctgagcagagcaacagcgaggatagcagtctgagtgatagt
gaacgaacgttaatgggggatgttcccgattatactaattgcgtagaacctcaattcccc
aattcaggaatagtttttgactacgccccacccaaattgactcgtatggaaaattgggat
atcgatgatgaatctgattactatttcaaagctattcctcactcagaagattcgcaaaaa
ttacttaaagtactggtggataagagaatgcagttgagcaccctgaagaaggaccttgag
ccgctcgtgggtgttccagtagagtatttcaaagtcttccggcactcgtcggactccggg
gaaacagagtgcagtagactaactgaacaattaagttgttatcaagacggcgagagactc
agtgtgaaattaggacgtgctttacgcagtggagagttcaaagtcaagctgttccagcta
cttattcattccactgagccgtttaaatttttgtgcgattggatagtatctaatgaaatg
acagttggtcaggcaaagaaggaaattctagctgaaataaaaagaaagtataatattgac
ataccgtacgaaaagtgtcgtttgaggaggaaaaattacaagacagcgtcaaaagtatgt
ttagacgaagaaaagttcgaagtattacgtttatatacacaatgcgaattattcgtacaa
gaactacctgacaaggagacagtcaaagattacaaccaggttgttctgtttgtgaggaag
tggtcaccttcccaaatgcaactaactccattcgaagaaatcacgatgaatggaaagtcc
attgaagaactgaaagaaaagttatcctcgatatcagatataccggcgcagtacatagag
gtagccaagggtagaaacgcatttccctgtgatatctctgtacttcaggtgcaaagtgaa
ctaaactggaatcaccaagcaacaactatagataccttaccacttaatcttgaagacggc
tcagttgtgtactttagggatagcagagaagaacctaagcagttgagctccgaagagctc
aaggagatagcaagcaaagagagttcgcgtctgacgtcactctcgtcgacgtcaagttat
agtccgcggcgagagcgagcgctaaaaatatatttggacaccaaatga
DBGET
integrated database retrieval system
