KEGG   Neodiprion fabricii: 124179652
Entry
124179652         CDS       T08986                                 
Name
(RefSeq) histone deacetylase HDAC1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nfb  Neodiprion fabricii
Pathway
nfb03082  ATP-dependent chromatin remodeling
nfb03083  Polycomb repressive complex
nfb04213  Longevity regulating pathway - multiple species
nfb04330  Notch signaling pathway
nfb04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:nfb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    124179652
   03083 Polycomb repressive complex
    124179652
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    124179652
   04350 TGF-beta signaling pathway
    124179652
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    124179652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nfb03036]
    124179652
Enzymes [BR:nfb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     124179652
Chromosome and associated proteins [BR:nfb03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     124179652
   HDAC complexes
    Sin3A-HDAC complex
     124179652
    BRAF-HDAC complex
     124179652
    REST complex
     124179652
    SHIP complex
     124179652
    MiDAC complex
     124179652
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     124179652
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    124179652
  Chromatin remodeling factors
   NuRD complex
    124179652
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 124179652
NCBI-ProteinID: XP_046420220
LinkDB
Position
4:16731016..16736736
AA seq 492 aa
MSTAPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGAIVEDSEADEKVNPDERLPQRDLDKRIQHENE
YSDSEDEGDGGRRDNRSFKGSRKRPRLEKGQESGDSDLKKEDDIKSEIKENEKDDKANVT
SEEVKKDGSVNP
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtccacagcaccgcacagtaagaagcgggtctgctactactacgacagtgatattgga
aactattactatggccaaggacatcccatgaaaccgcatcgcataaggatgacccataat
ttgttacttaattatggactgtacagaaagatggaaatttatcgaccacacaaagctacc
gccgatgaaatgaccaagtttcacagcgacgagtatatcaggttcctcagatcaatcagg
cccgacaatatgtctgaatacaacaaacaaatgcaacgcttcaatgtgggtgaagattgt
ccggtgtttgacggcttgtacgagttttgccagctatcagcaggaggctcagtagcggct
gcagtcaagttgaacaaacaggcatcagaaatttgcataaattggggaggcgggctgcat
catgccaagaaaagcgaggcctctgggttttgctatgtcaacgacatagtcctcggtatt
ttagaattgctcaagtatcatcagagagtattatatattgacatagatgttcaccacggc
gacggcgttgaagaagccttttacacaactgatagggtaatgacagtatcgtttcacaaa
tatggagaatatttccctggcactggtgaccttcgagatattggtgccggaaagggtaag
tactacgcagtcaatattcctctgagggatggcatggatgatgaaagttacgaatcgata
tttgtaccaataatatcgaaagttatggagacgtttcaaccgtctgcagttgttctgcaa
tgtggtgctgattcgttaacaggtgacagacttggctgcttcaatctaacggtccgagga
catggcaaatgcgtcgagtttgttaaaaagtacaatttaccgttcctcatggtaggtggc
ggtgggtacaccatccgtaacgtttctaggtgttggacatatgaaacatcagtagctttg
ggatcagaaatagccaatgaactgccctacaatgattactttgaatatttcggtcccgac
ttcaaactgcacataagtccctctaatatggcgaaccagaatacacctgaatatctggag
aaaatcaaaacgagattattcgaaaatttgaggatgctacctcacgcaccaggggttcaa
gttcaggccattcctgaagatggcgccattgtcgaggactctgaagccgacgagaaagta
aacccagacgaaagactgccgcagagagatttagacaaacgaatacagcacgaaaatgag
tatagcgatagcgaagacgagggagatggtgggagaagggataacagatcattcaagggc
tccagaaaaaggccgcgactcgagaaagggcaagaaagcggtgattcagatttgaaaaaa
gaagatgatatcaaatcagagataaaagagaacgagaaagatgacaaagccaacgtaacg
agcgaagaggtaaagaaagacggaagtgtgaatccctga

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