Neodiprion fabricii: 124179652
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Entry
124179652 CDS
T08986
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03082
ATP-dependent chromatin remodeling
nfb03083
Polycomb repressive complex
nfb04213
Longevity regulating pathway - multiple species
nfb04330
Notch signaling pathway
nfb04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124179652
03083 Polycomb repressive complex
124179652
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124179652
04350 TGF-beta signaling pathway
124179652
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
124179652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfb03036
]
124179652
Enzymes [BR:
nfb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124179652
Chromosome and associated proteins [BR:
nfb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
124179652
HDAC complexes
Sin3A-HDAC complex
124179652
BRAF-HDAC complex
124179652
REST complex
124179652
SHIP complex
124179652
MiDAC complex
124179652
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
124179652
Heterochromatin formation proteins
Other heterochromatin formation proteins
124179652
Chromatin remodeling factors
NuRD complex
124179652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
124179652
NCBI-ProteinID:
XP_046420220
LinkDB
All DBs
Position
4:16731016..16736736
Genome browser
AA seq
492 aa
AA seq
DB search
MSTAPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGAIVEDSEADEKVNPDERLPQRDLDKRIQHENE
YSDSEDEGDGGRRDNRSFKGSRKRPRLEKGQESGDSDLKKEDDIKSEIKENEKDDKANVT
SEEVKKDGSVNP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagcaccgcacagtaagaagcgggtctgctactactacgacagtgatattgga
aactattactatggccaaggacatcccatgaaaccgcatcgcataaggatgacccataat
ttgttacttaattatggactgtacagaaagatggaaatttatcgaccacacaaagctacc
gccgatgaaatgaccaagtttcacagcgacgagtatatcaggttcctcagatcaatcagg
cccgacaatatgtctgaatacaacaaacaaatgcaacgcttcaatgtgggtgaagattgt
ccggtgtttgacggcttgtacgagttttgccagctatcagcaggaggctcagtagcggct
gcagtcaagttgaacaaacaggcatcagaaatttgcataaattggggaggcgggctgcat
catgccaagaaaagcgaggcctctgggttttgctatgtcaacgacatagtcctcggtatt
ttagaattgctcaagtatcatcagagagtattatatattgacatagatgttcaccacggc
gacggcgttgaagaagccttttacacaactgatagggtaatgacagtatcgtttcacaaa
tatggagaatatttccctggcactggtgaccttcgagatattggtgccggaaagggtaag
tactacgcagtcaatattcctctgagggatggcatggatgatgaaagttacgaatcgata
tttgtaccaataatatcgaaagttatggagacgtttcaaccgtctgcagttgttctgcaa
tgtggtgctgattcgttaacaggtgacagacttggctgcttcaatctaacggtccgagga
catggcaaatgcgtcgagtttgttaaaaagtacaatttaccgttcctcatggtaggtggc
ggtgggtacaccatccgtaacgtttctaggtgttggacatatgaaacatcagtagctttg
ggatcagaaatagccaatgaactgccctacaatgattactttgaatatttcggtcccgac
ttcaaactgcacataagtccctctaatatggcgaaccagaatacacctgaatatctggag
aaaatcaaaacgagattattcgaaaatttgaggatgctacctcacgcaccaggggttcaa
gttcaggccattcctgaagatggcgccattgtcgaggactctgaagccgacgagaaagta
aacccagacgaaagactgccgcagagagatttagacaaacgaatacagcacgaaaatgag
tatagcgatagcgaagacgagggagatggtgggagaagggataacagatcattcaagggc
tccagaaaaaggccgcgactcgagaaagggcaagaaagcggtgattcagatttgaaaaaa
gaagatgatatcaaatcagagataaaagagaacgagaaagatgacaaagccaacgtaacg
agcgaagaggtaaagaaagacggaagtgtgaatccctga
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