Aspergillus fischeri: NFIA_029000
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Entry
NFIA_029000 CDS
T01070
Name
(RefSeq) TFIIH and nucleotide excision repair factor 3 complexes subunit (Tfb2), putative
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nfi
Aspergillus fischeri
Pathway
nfi03022
Basal transcription factors
nfi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NFIA_029000
09124 Replication and repair
03420 Nucleotide excision repair
NFIA_029000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfi03021
]
NFIA_029000
03400 DNA repair and recombination proteins [BR:
nfi03400
]
NFIA_029000
Transcription machinery [BR:
nfi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NFIA_029000
DNA repair and recombination proteins [BR:
nfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NFIA_029000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
4588997
NCBI-ProteinID:
XP_001262366
UniProt:
A1D9I8
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MAAAPPRPFDYLESLPGTVFNKLYQQPSTALAIFRRMLPDLAKCFVMALLYLKDPLPAAD
LEAWVRPDSLKLHIMTSTTTSDNVKAYTVTDPFASSLRQALTGAEQTQSFGVLSQISDEE
AVSIADLDEYARRQWEGVLGYMVGTSGLGMQRDVSLSKGVKELLQAGHLVEIRDRRVEIT
QDGFAFVLQDVGTQVWHILVLYVESAAAIGMDSVEVLSFVFFLSSLELGKSYEKKQLTSN
QLRTLTDLADFGIVYQETPDATHFYPTRLATTLTSDSSTLSNPLAGSLSGPTGTSSSKAG
SGFIIIETNYRLYAYTSSPLQISLIALFTTLKYRFPNLITGKITRQSVRRAVEMGITADQ
IISYLSTHAHPQMRKHNVSRSTSNQAGMPVSVLPPTVVDQIRLWQLERDRVKATHGFLFR
DFNTLAEYEAPCRYAEEIGVLVWKSDRKRMFFVTRHHQVAAFLKSRRK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcaccaccgcgtcctttcgattacctggagagcttgcctgggactgtcttc
aacaagctctaccagcagccctccactgctctcgccattttcaggcgcatgctgcctgac
ctggcaaaatgttttgtgatggcccttctctacctcaaggacccacttccagcagcggat
ttggaggcgtgggtcagaccagacagtttgaagttgcacattatgaccagcactacgacg
tcggataacgtaaaagcatacaccgtcaccgatccttttgcatcctctcttcggcaggct
ctcaccggcgccgagcaaactcaatcgttcggtgtcctgtcgcagatatctgacgaagaa
gccgtctccattgcggatctggacgagtatgccagacggcagtgggaaggagttctggga
tacatggtggggacaagtggactaggcatgcaacgcgacgtcagtttgagcaaaggcgtc
aaggaactcttgcaggcgggccaccttgtcgagatcagggatcgtcgagtggaaattact
caggacgggttcgctttcgttctacaggacgttggcactcaagtatggcatatcctagtt
ctttatgttgaaagcgccgcggccatcggtatggacagcgtcgaggtgctttcctttgtg
ttcttcctgagcagtttggaactggggaaatcgtatgagaagaagcagttgacgtccaac
caattgcgcactctgaccgacttggccgactttggtatcgtctaccaagaaaccccggat
gccactcatttctacccgacgcgcctcgcaaccaccttgacatccgactccagcactctg
agcaatcctctcgctggctccctttccggacctacgggcacatcctcgagcaaggccggt
tccggattcatcatcatcgaaacaaattaccgactctacgcatatacctcctcaccgctc
cagatctccctcattgcacttttcaccacattgaaatatcgcttcccgaatttgatcacg
ggtaaaatcacccgccagtccgtccgtcgtgcagtcgagatgggcattaccgccgatcaa
atcatctcttacctatcaacacacgcacacccgcaaatgcgcaagcacaatgtgtccagg
tctacttctaatcaagccggaatgccggtgtccgtcctaccgcctaccgtcgtggatcag
attcgtctttggcagctcgagagagatcgcgtcaaagcgacacatggctttttattcagg
gacttcaacactctggccgagtatgaggccccgtgtcgatatgccgaggagatcggcgtt
ctggtctggaaatctgatcgcaagcggatgttctttgtcactcgacatcaccaggttgct
gctttcttgaagagcaggaggaagtaa
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