Aspergillus fischeri: NFIA_029030
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Entry
NFIA_029030 CDS
T01070
Name
(RefSeq) THO complex subunit Tho1, putative
KO
K12878
THO complex subunit 1
Organism
nfi
Aspergillus fischeri
Pathway
nfi03013
Nucleocytoplasmic transport
nfi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NFIA_029030
09122 Translation
03013 Nucleocytoplasmic transport
NFIA_029030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_029030
03041 Spliceosome [BR:
nfi03041
]
NFIA_029030
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
NFIA_029030
Spliceosome [BR:
nfi03041
]
Complex C
Other components
EJC/TREX
NFIA_029030
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NFIA_029030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
4589000
NCBI-ProteinID:
XP_001262369
UniProt:
A1D9J1
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MSLAEHDAMHVYRNLVDDLLNRAEQIKKDAQIEPPLTEAHLGESIWAIQGEEERLVEQLS
QQTRFAAVELAFREKFYSLLASTTIDEPSFIRMWNLLDIISIFSDNEQCEPGLIFWLIEE
LLDSQTIDGCRKVFDYLESRRERNTKKHFKQKSLIILRSCNELLRRLSRAEDTVFCGRVF
IFLFQSFPLGDKSAVNLRGEYHTENVTTFDEITKLGAKESDDMDVEMSDAKETLTATEAQ
GYDHDGQPPPSASASQTPVQGQAKVPKLLVSKTEDKDTEKAVDLDALYPVFWGLQAYFSA
PTKVFDSQHFSSFMTGLENTLIAFKNIRTDLENQSASKTAEEIRKSTKRKRSVDGQEIAS
SFNPKYLTSRDLFDLEVNDTAFRRHVLVQALILLDFMLSLTPKAKAKLADLTNKSVLYGF
VLNEEDAKWATKMRKAIEEYLQEGTGGKFYYRMVDTVLSRDKNWVRWKAEGCPLIERPAV
SVAEYLGARENATKTYANKRLRPSPMGALNLNFLAEGESLSSIEKLKEPERYSVPSADSF
MMGIMDDELDIDTAHTKEDKDTAIRAKASKTWRVLRLSAKGKLAAFDKIDDGKNLKALFE
APQPPESTTPPAHEPASQASESAAKASSDAEPETAASGQEEQPMEKNATTVFEQTPGDLN
DNNQEAVPVAPQAT
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgctgagcatgatgcgatgcatgtatacagaaacctggtcgatgatctcctg
aaccgtgcagagcaaatcaaaaaagatgcgcaaatagaaccccctttaacagaagctcat
ttgggcgagtcaatatgggcgatccagggggaagaagagcgattggtggaacaactgagc
cagcagacacggtttgcggcagttgaactcgcgttcagggaaaagttctacagcctcctg
gcgagcacgacaattgacgagccctcattcattcgcatgtggaatttgcttgacataatc
tcaattttttctgataatgaacagtgcgagcccggtttgatattctggttgatcgaggag
ttgctagatagccagaccattgatggttgtcgcaaggtctttgattatttggagtcccgc
cgagaacggaatactaagaaacacttcaagcaaaagagcttgattatccttagatcctgc
aatgagctgcttcggaggctgtcccgggcagaggacacggtattttgtggccgcgtcttc
atatttctatttcagagtttcccgctcggagataaaagtgctgttaatctccgcggcgaa
tatcacaccgaaaatgttaccacctttgacgagatcaccaaattaggagccaaggagagt
gatgatatggatgtggaaatgtccgacgcaaaggaaacattaacagcaactgaagcccag
ggatatgatcatgatggccaaccaccgccttcagccagcgcttctcagacgcctgtacaa
ggacaagcaaaagtccccaaacttcttgtctcgaaaactgaagacaaggatacggagaag
gcagttgatttagacgctctgtaccctgttttctgggggctgcaggcgtacttctctgcc
ccgacaaaagtgtttgactctcagcacttctcgtccttcatgactggtttggaaaacaca
ttgatcgcgttcaagaatatcagaacagaccttgagaatcaaagcgccagtaagacagcc
gaggaaatacggaaatctacaaagcggaaacggagcgtggatggccaagaaattgcgagc
agtttcaaccctaagtatttgacaagcagagacttgtttgatctcgaagtcaacgacact
gctttcagaagacacgttcttgtacaggcattgattctcctggattttatgctttctctt
acaccgaaagcgaaagcaaaacttgctgatttgacgaacaaatcagtgctttacggtttt
gtattgaatgaagaggatgccaagtgggcaaccaagatgaggaaagccattgaggaatat
ctacaagaaggcaccggtggtaaattctattatcgcatggtcgacacagttctatcgagg
gataagaactgggtccgttggaaagccgagggctgtccgctcattgaaaggcctgccgtc
tcagtcgcagagtatctcggtgctcgcgagaacgcgacaaaaacctacgcaaataagcgg
cttcgtccctcgcctatgggcgccctgaatctcaactttctggccgagggagagtcacta
tcaagcatcgagaagctgaaggaaccggagagatattctgttccctccgccgactcgttc
atgatgggcatcatggatgatgaattagacattgatactgcgcatacgaaggaagacaag
gacacggcgattcgggcaaaagccagtaaaacttggcgcgttctacgtctttccgctaaa
ggcaaactcgcggcctttgacaaaattgatgacggcaagaatttgaaggctctgtttgaa
gccccgcaacctcctgagagcaccactcctcctgctcatgaaccggcttcccaggcttct
gagtccgcagctaaggcgtccagcgatgccgaacccgaaaccgctgcgtcaggacaagaa
gaacagccaatggaaaagaatgccacgacagtttttgaacagacaccgggcgatctgaat
gataacaatcaagaagcagttcccgtggccccccaggcgacctga
DBGET
integrated database retrieval system
