Aspergillus fischeri: NFIA_057150
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Entry
NFIA_057150 CDS
T01070
Name
(RefSeq) nonsense-mediated mRNA decay protein Upf3, putative
KO
K14328
regulator of nonsense transcripts 3
Organism
nfi
Aspergillus fischeri
Pathway
nfi03013
Nucleocytoplasmic transport
nfi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NFIA_057150
03015 mRNA surveillance pathway
NFIA_057150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_057150
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NFIA_057150
mRNA cycle factors
P-body specific factors
NFIA_057150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
4584778
NCBI-ProteinID:
XP_001258263
UniProt:
A1DNJ5
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MTQISDGKSTGGVLQIPAAATQKNASTASRKAPKPPAPRLKLLVRRLPPGLTQSEFENAL
GSEWMVGAGKVDWYQYKPGKVSKDYAKPSRPSRAYIHVTSSEHIAPLSDKIRQTSFLDAR
NTFNDPVLLGPPSLEFAPYAKIPGSRVRKDARQGTIDQDPEFIAFLESLTQPITKPTTVE
TPTDAEEKKETVTTTPLVQYIKEKKANKAKEASSKSSRHAKGEKESKSEKVQAKKLLQRP
DKDAALAPTGDKAEKKSRTSDKATKEAVKAANRAANAAAKQAAKPAATQNTSKDSAQPAS
TERKRERNNVAAAAKILQRDLGLAPSGGRRRAGRGASTEADSSKKEPDAAATADTGKKDI
KSGKAASPSTPKSKANATPPSGEPASSRAQSGPNAAPTSAPSAPKQSKSAKGKPAAPIAS
PTATQAFLKHANPSQGVTEPLLETAFAPFGEILKVEIDKKKGFGYIDFAEPDGLQKAIAA
SPVTVAQSQVVVLERKINPGAEKTRGKGRSEQPVPNNGSNSNGNRGAKQGSDGGSGPGTP
SSSRGPRGGRGSRNKGGSKSNGANASSNTTSGKTGGETK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagatttccgatggcaagtcaacagggggtgtacttcagattcctgcagctgca
acacagaagaatgcatcaacagcttccaggaaggctccgaagccccctgcgccgcgactc
aaattgctcgtgagacggttaccaccgggtttgacccaatccgagttcgaaaatgctctg
ggttcagagtggatggttggagcaggaaaagtcgactggtaccagtacaagccaggcaag
gtatccaaagactatgccaaaccttcgagaccctcccgcgcctacatccatgttacatcc
agtgagcatattgcgcctctatcagataaaatccggcaaacatcgttcctagatgctcgc
aacacgttcaatgatcccgtgctcttgggaccgccgtctctagagttcgctccttacgcc
aaaattcccggtagtcgtgtacggaaggatgcccgccagggtacaattgatcaagatccc
gaattcattgcgttcctcgaaagtctgacacagccgattacgaaacctaccactgttgaa
actcctaccgacgccgaagaaaagaaggaaaccgttaccactacgcctctcgtgcagtat
atcaaggaaaagaaggccaacaaagccaaagaggcctccagcaagtcctccaggcatgcc
aagggcgagaaggagtcgaagtcggagaaggtacaagccaagaaacttttgcaacggccg
gacaaggatgctgccctggcacctacaggagacaaggcagagaagaagtccaggacctca
gacaaggcgacgaaagaagcagtgaaagcagcaaacagagccgccaatgctgctgctaag
caagctgctaaaccagcagcgacccaaaatactagcaaagatagtgctcagcctgcttca
actgaacggaaacgcgagcgtaataacgtcgctgcggcagccaagattcttcaacgagac
ttggggcttgcaccttcaggcggccgtcggagggctggtaggggtgcttcgacagaggcg
gactcgagcaagaaagagccggacgctgctgctactgcagatactggcaagaaggatatt
aagtctgggaaggccgcgtcaccatcgactccaaagagcaaagccaatgctacacctcca
tctggcgagcccgcgtcatctcgtgctcaatctggtccaaatgcagcccctacgagcgca
ccatccgcaccgaagcagtcgaaatcagcgaaaggcaagccagccgcgccaattgcttcg
cctacggctacacaggcgttcctcaagcacgccaatccatcacagggagttacagaacca
ttacttgaaactgcatttgcacctttcggagagatcttgaaggtggagattgacaaaaag
aaggggtttggctacatcgactttgcagaaccggatggtcttcagaaggcaattgccgct
agtcctgtcacggtcgcgcagagtcaagtcgtcgtgcttgaacgcaagatcaatcctggt
gcagaaaagactcgcggcaagggacgaagcgagcaacccgtcccgaataatggcagcaac
agcaacggcaatcgtggtgccaagcagggctcagatggaggatctggaccaggcacacca
tcctcttctcgtggaccgcgtggaggtcgcggatccaggaacaagggcggttcgaagagt
aacggagcaaatgccagttcaaacacaactagtgggaagaccggtggggagaccaaatga
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