Candidatus Nitrosocosmicus franklandus: NFRAN_0695 Help Entry NFRAN_0695        CDS       T05935                                  Symbol lig Name (GenBank) DNA ligase   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism nfn  Candidatus Nitrosocosmicus franklandus Pathway nfn03030   DNA replication nfn03410   Base excision repair nfn03420   Nucleotide excision repair nfn03430   Mismatch repair Brite KEGG Orthology (KO) [BR:nfn00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     NFRAN_0695 (lig)    03410 Base excision repair     NFRAN_0695 (lig)    03420 Nucleotide excision repair     NFRAN_0695 (lig)    03430 Mismatch repair     NFRAN_0695 (lig)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:nfn03032]     NFRAN_0695 (lig)    03400 DNA repair and recombination proteins [BR:nfn03400]     NFRAN_0695 (lig) Enzymes [BR:nfn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      NFRAN_0695 (lig)     6.5.1.6  DNA ligase (ATP or NAD+)      NFRAN_0695 (lig)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      NFRAN_0695 (lig) DNA replication proteins [BR:nfn03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     NFRAN_0695 (lig)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      NFRAN_0695 (lig) DNA repair and recombination proteins [BR:nfn03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      NFRAN_0695 (lig)    NER (nucleotide excision repair)     Other NER factors      NFRAN_0695 (lig)    MMR (mismatch excision repair)     Other MMR factors      NFRAN_0695 (lig) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-ProteinID:  VFJ13017 UniProt:  A0A484I9W6 LinkDB All DBs Position NFRAN:636420..638171 Genome browser AA seq 583 aa AA seqDB search MLFLELAQTFEKMEKTSSRLDLTQYLVELMKVTPSNIIDKVIYLIQGKLGPDHSSKELGI AEKMVIRSLSLATGISSSEIKLKFNEIGDLGDVVYKLNYNKSQSTLFSEPLTVERVFDTL TKIANTSGTGSLNLKIRYITSLLNNVSNLEAKYLLKLILGNLRLGIANYTLMDALAIGFT HDKGNRVILEKAFNVSSDLGNIARILAQGSIEEVQSISVSLFIPVRPMLAERAADSKEAL SKIKGKCLAEFKIDGERVQVHKRGTRIELFTRSLENITSHFPEIVKMFTDLDVDNFIVEG EVVAINPHDQKFLPFQSLMRRRRKHDIQQAMEAYPVILNLFDILYHNGNDLMNLVFEERR KILEINFGNIKSDRLKLVNQKRVSNIDEIDNFMAESLDSGCEGLMLKDSNSRYRAGAREW AWIKLKKEYAGTITDSVDLVVLGALYGKGRRVGKYGALLLGSYSKEEDTFYTICKVGTGF KDDALSVLYDTLSKQIIHKKHPRVQSGNVHMDVWFEPSVVLEIISPEITLSPVYTTGRNM IKPGYGLALRFPKFSGNIREDKSPEDITTVEEIIDLYNNQFKQ NT seq 1752 nt NT seq  +upstreamnt  +downstreamnt atgctattcttagaactagctcaaaccttcgagaaaatggaaaaaacgagcagtagatta gacttgacacaatatttagtagaactaatgaaagtaacaccatccaacataattgacaaa gttatatatttgattcaaggaaagcttggaccagaccacagctcaaaggaattaggaata gctgaaaaaatggttatacgatctttgtcacttgctactggcatatcatcgtcggaaata aagttaaaatttaatgaaattggtgatttgggagatgtagtgtacaagttaaattacaat aaatcccaaagtactttatttagcgaacctctcacagttgaaagagtatttgacacatta acgaaaatcgcaaacacttccggaacaggttctttgaatttgaagattaggtatatcact agcctactaaataatgtgtcaaatctagaagcaaagtatttactgaaactaattttaggg aacttgagattgggaatagcaaactacaccttaatggatgcactagctataggatttaca cacgataagggaaatagagtcatattggaaaaagctttcaacgtatctagtgatttggga aatatagcacgaatattagctcagggatccattgaggaagttcaatcaatttcagtctct ttattcataccagttaggcctatgctagcagaaagagcagcggattcaaaagaagcttta agcaaaatcaaaggtaagtgtttagcagaatttaagatcgatggagaaagagtacaggtt cacaagagaggaacaaggattgaactattcactagaagcttggaaaacatcacatcacat ttcccagaaatcgtaaagatgtttaccgatctggatgtagataactttattgtagaagga gaggttgtagcgattaatccacatgatcaaaaatttctaccatttcaaagtttaatgcgt agaaggagaaagcacgatattcaacaagcgatggaagcatatccagtaatattgaatctg tttgacatattgtaccataatggtaatgatttaatgaacttggtatttgaggaaagaaga aaaatcctggagattaatttcggaaatatcaaaagcgatcgtcttaaacttgtaaaccaa aaaagagtttcaaatatcgatgaaattgataattttatggcagagtccttggacagcggt tgcgaaggtttgatgctgaaagattctaatagcagatatagagcgggtgcccgagaatgg gcatggataaaattgaagaaagagtatgcagggacaattactgattccgtagatttggta gttttgggagctttatacggaaaaggtagacgtgtaggtaagtacggagccttattatta ggttcatatagcaaagaagaagacaccttttacacaatatgcaaggttggtactggtttt aaggatgatgccctctctgtattgtatgatacactcagcaaacagataattcacaagaaa catcctagagtgcaatcaggcaatgttcacatggatgtctggtttgaaccaagtgtagtt ttggaaatcatttctcctgaaataactctaagtcctgtttacacaacaggaagaaacatg attaaaccaggatacgggttggcactcaggtttccaaaattttctggcaacattagagaa gacaagtctcctgaggacattacaactgtggaggaaataatagacctttacaataatcaa ttcaaacaatga

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