Nocardia farcinica NCTC11134: ERS450000_04032
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Entry
ERS450000_04032 CDS
T04524
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3%2C5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00521
Streptomycin biosynthesis
nfr00523
Polyketide sugar unit biosynthesis
nfr00541
O-Antigen nucleotide sugar biosynthesis
nfr01100
Metabolic pathways
nfr01110
Biosynthesis of secondary metabolites
nfr01250
Biosynthesis of nucleotide sugars
Module
nfr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
ERS450000_04032 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ERS450000_04032 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ERS450000_04032 (rmlC)
Enzymes [BR:
nfr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
ERS450000_04032 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CRY80766
UniProt:
A0A0H5PDU5
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All DBs
Position
p2:531415..531963
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AA seq
182 aa
AA seq
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MEIRELSIPGAWVVTPRVFHDERGSFAEAFKASEFEKATGRPMDLRQVNCSVSAAGVLRG
IHYTENPPGQAKYVTCVRGAFLDVVVDLRRGSPTYGRWDSVLLDDVDRRSVFVSEGLGHA
ILSLEDDSTVTYLCSLEYTPELDGEIDAFDPTLAIEWPRTGRDGRPLTYLRSPKDTAAPP
FS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggagatccgggagctctcgattccgggggcgtgggtggtcaccccgcgcgtgttccac
gacgagcggggcagcttcgccgaggcgttcaaggcctcggagttcgagaaggccaccggc
cggccgatggacctgcggcaggtgaactgctcggtgtcggcggccggggtgctgcgcggc
atccactacaccgagaacccgcccggtcaggccaagtatgtgacctgcgtgcgcggcgcc
ttcctggatgtggtggtcgacctgcgccgcggctcacccacctacggccgctgggacagc
gtgctgctcgacgacgtggaccgccgctcggtgttcgtgtccgagggcctcggccacgcc
atcctgtcgctggaggacgactccaccgtcacctatctgtgttcgctcgagtacaccccg
gagctggacggcgagatcgacgccttcgatccgaccctggccatcgagtggccgcgcacc
ggccgcgacggcaggccgctgacctacctgcgttcgccgaaagacactgccgccccgccc
ttctcctga
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