Nothobranchius furzeri (turquoise killifish): 107376291
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Entry
107376291 CDS
T05163
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like
KO
K14946
RNA binding protein fox-1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107376291
Spliceosome [BR:
nfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107376291
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
107376291
NCBI-ProteinID:
XP_015800804
UniProt:
A0A1A8VCP5
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All DBs
Position
sgr03:complement(69234830..69310080)
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AA seq
464 aa
AA seq
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MLMSTDVASIMLPVNRGIMDRERDIDTVAAGPHASAAAGPAVVRGMKRGDPEPDAQTAAA
LTDLAGAECKRPRIDGTGSVVGDIGQNNEPLNPGFHGYPPHSQGSQDSAGGQEGLVAPPF
ATFPPPPPPQNGLPGTEFGPGAMFGAGGPGAAEVGVGANGIAATSSNNVKLDEAAQGEVG
AQCVAGGAGAGGSAAESTEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNE
RGSKGFGFVTFETSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALS
TLPYAGWKLSPMVGAVYGPELYAVPGFPYPTAAAAAAATTAAAAFRGAHLRGRGRPVYSA
VRAAVPQPAIPAYPGVVYQDGFYGAAEIYGGYPAAAAAAAAAAYRYAQPAAVTGATAAAA
AYSDSYGRVYTTDPYHALAPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctataatgctacccgttaatcggggaataatggac
cgcgaaagggacattgatacagtagccgccggacctcatgcgagcgcggccgcgggtcca
gcggttgtccgggggatgaaacggggagacccggagcccgacgctcagactgccgctgcc
ctgaccgacctggccggggcggaatgcaagagaccacggatagacgggaccgggagcgtg
gtcggagacatcggacagaacaatgagcccttaaaccctggtttccatggatacccacct
cacagtcagggctctcaggattcagctggaggacaggagggtctggtggccccacccttc
gcaaccttccctcctccgccccctcctcaaaacgggctcccggggacagagtttggcccg
ggggctatgttcggtgctgggggcccaggcgcagcagaggtaggggttggtgctaacgga
atcgccgccacaagcagcaacaatgtaaagctggacgaggccgctcagggtgaggtggga
gctcagtgtgttgcaggaggagcaggagctggaggctctgcagcagagtccacggaggcg
aagggcacccccaaacgcctccacgtctcaaacatccccttccgctttcgggacccagac
ctcaggcagatgtttgggcaatatgggaagattctggatgttgagatcatattcaacgag
agggggtcaaagggtttcggcttcgtgacatttgaaaccagcgccgatgcggagaaagcc
agggaaaagctccacggcactctggtggaaggtcgtaagattgaggtgaataacgccacc
gccagggtgatgactaacaagaaaatggtcagcccctaccctaatggagaggctctcagc
acgctgccctatgcagggtggaaactgagtcccatggtgggggccgtgtatggaccagag
ctctacgcagtgccagggtttccctacccgacagcagcagcagctgcagccgccaccacc
gcggcggcagcgtttcgtggcgcccacctgaggggccgagggcggcccgtttacagcgcc
gtgagggccgccgtgcctcagcctgccatccctgcctaccctggcgtggtgtatcaggat
gggttttacggagctgcagagatctatggaggctaccctgctgctgctgccgccgccgcc
gctgccgcctaccgctacgctcagcctgcagcggtaaccggagcaaccgccgcagcagcc
gcctacagtgacagttacggtcgggtgtacaccacagatccgtaccacgctttagctcca
gctgctgccgcctacggagtcggcgccatggccagtttataccgagcgggatacagccgc
ttcgctccgtactaa
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