Nothobranchius furzeri (turquoise killifish): 107380214
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Entry
107380214 CDS
T05163
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107380214 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107380214 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107380214 (usp16)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107380214 (usp16)
Peptidases and inhibitors [BR:
nfu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107380214 (usp16)
Ubiquitin system [BR:
nfu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107380214 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
107380214
NCBI-ProteinID:
XP_015806827
UniProt:
A0A9D2YDE1
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Position
sgr06:19731247..19742641
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AA seq
872 aa
AA seq
DB search
MCHLAASGKSVRVVWSASNTKSTLVEMGKKRGKDKTSREEDAFDLTVPTCRHIKKGTDQT
LLKKLPSISDWSRCQDCKHEDKENINTSEEQDSEEDTDAGGIWMCLKCGHRGCGRNSENQ
HAIKHYETPRSDPHCLVVSLDSWSVWCYICDNEVQYSRTGQLAQLLSNMKKQTSSGSIRR
PEKRVKEEIKEEVDLLEAEQKTETVNTKENENEENTESKNNQQKNIKKEIAGKPPNRDMT
ENNIVPVKGLSNLGNTCFFNAVIQNLSQTQLLRQILNEVTKEKISLEINPGASLDLEPLQ
VELDQPGSLTLALCKLLNEIQESIKGVVTPRDLFTQVCKKAARFKGFQQQDSQELLRYLL
DGMRAEELKRVSTGVMETLKQSKKGADGEQLKALAKDYEKNGLPKNFVDQVFGGEMMSTI
MCQQCRTVSVVTEMFLDLSLPVSNEAYGKKNPKKVPEKTSESSPEGRISPDFISGSDGVP
TGVGSKYQQKKAKKQAKKQSKHQKRQQKLDGRATLDSLTSPSRADKDMDVRENETADCEQ
HENPSVMNEQSLVSAGLPEQDQNAELENEKDEDSAADCDSSAAPSPVDNRFTVLSEEQHS
QDSSSSLCNGISTMELVEDEEDDATLVHKMQQVALDDAFIEDSDAMEQSTESGDDVLEAK
VYTVINQDPELAFNTLAARTVPERQECSVQSCLFQFTEVETLTQNNSLLCVACSKQLLRK
AGGSKKNVYTDALKQMLISSPPAVLTLHLKRFQQSGYSICKVNRHVNFPMVLDLASYCAA
KCKNISEGDSQILYSLYGIVEHSGTMRSGHYTAYIKVRPERLKTTSNGIATEGDPEPPKG
SWFHVSDTSVQPVSESKVLSSQAYLLFYERLV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatctggcggcttctggaaaatctgtgcgtgttgtgtggtcagcgtccaacact
aaatctactttggtggaaatgggaaagaaaagaggaaaagacaagacctccagagaggag
gatgcatttgacctgacagttccaacctgcagacacatcaagaagggaacagaccaaact
cttctgaagaaactccccagtatttctgattggtcgaggtgtcaggattgtaaacatgag
gacaaagaaaatatcaacaccagtgaagaacaggactctgaagaggacacagatgcaggg
gggatatggatgtgtttgaaatgtggccacaggggttgtggaagaaattctgagaatcag
catgccatcaaacattatgagactcctcgatcagatccacactgtctggtggtcagttta
gacagctggagtgtgtggtgttacatttgtgacaatgaggtccagtactccagaacaggg
cagttggcacagctgttgagcaacatgaaaaagcaaacctcgtctggttctataagaaga
ccagagaaaagagtaaaggaggaaataaaggaggaggtggatctgctggaggccgaacag
aagacagaaactgtaaacacaaaggaaaacgagaacgaggagaacactgaaagcaagaac
aatcaacagaagaacatcaaaaaagagattgctgggaaacctccaaaccgcgacatgact
gaaaacaacattgttccggtaaaagggctgagcaaccttggaaacacttgtttcttcaac
gcagtcattcagaatctttcacagactcaacttttgagacagattctcaacgaagtgaca
aaagagaaaataagtctggagatcaaccctggtgcctctttagatttggaacctttacaa
gtagagttggaccagcctggatcccttactctggctctgtgtaaactactcaatgaaatc
caggaatccataaagggggtggtaacaccacgggacttattcacacaagtttgcaaaaag
gctgccaggtttaaggggtttcagcagcaggacagccaggagctgctgcgctaccttctg
gatgggatgagagccgaggaacttaagagagtaagcacaggagtgatggagacattgaaa
caatccaaaaagggcgcagatggagagcagctcaaagctctagcaaaagattacgagaaa
aatggactccccaaaaactttgttgaccaggttttcggaggggaaatgatgagtactata
atgtgtcagcagtgcagaacggtgtctgtagtcacagagatgtttttggatctctccctt
ccagtttctaatgaggcgtacggaaagaaaaacccaaagaaagttcctgagaagaccagc
gagtcgagtccagagggcagaatcagccctgacttcatcagcgggagtgatggcgtccca
actggcgtcggcagcaaataccagcagaaaaaagctaaaaagcaggctaagaaacaatct
aagcatcaaaaaaggcagcagaagcttgatggcagagcgacattggattccttgacatct
cctagtcgagcggataaggatatggatgtgagggaaaatgaaaccgccgactgtgaacaa
catgaaaacccctcagtgatgaatgaacaaagtcttgtttcagccggtttacccgaacag
gatcagaatgccgagctagaaaacgagaaagacgaagattcagcagctgactgcgactcg
tctgcagcaccatcgccggtcgacaatcgtttcaccgtcttgtccgaagagcagcactct
caggacagcagcagcagcttgtgtaatggcatttccaccatggagctggtagaggatgag
gaggacgacgcaacgttggttcataaaatgcagcaggtggccttggatgatgctttcatc
gaagactccgatgcgatggagcagagcacagagagcggagatgatgtgctggaagccaaa
gtgtacaccgtaataaaccaagacccggagctggccttcaacaccctggctgccagaacc
gtcccagagaggcaggaatgttcggtgcaatcgtgtctttttcagttcacagaggtggaa
actctcacgcagaacaacagcctgctgtgtgtcgcctgtagcaaacagctgctgaggaaa
gctggaggatccaagaaaaacgtctacacggatgccttgaagcaaatgttaatttcctct
cccccagctgtcctcacccttcatttgaaaagatttcaacagagtggatacagcatttgt
aaagtaaaccgacacgtcaacttcccgatggttcttgatctcgcttcttattgtgcagcc
aaatgcaagaatatttcagaaggagatagtcagattttgtacagtttgtatggaatcgta
gagcacagcggaacaatgaggtctggtcattacacagcatatataaaagttcgacctgaa
cgtcttaaaacgacatctaacgggattgctacagaaggagatccagaaccgcccaaagga
tcctggttccacgtcagtgacacaagtgtccagcctgtcagtgagagcaaagtcctgagc
agccaagcctacctcctcttctacgaaagactcgtctaa
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