Nothobranchius furzeri (turquoise killifish): 107381342
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Entry
107381342 CDS
T05163
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107381342 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107381342 (usp47)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107381342 (usp47)
Peptidases and inhibitors [BR:
nfu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107381342 (usp47)
Ubiquitin system [BR:
nfu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107381342 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
107381342
NCBI-ProteinID:
XP_015808438
UniProt:
A0A1A8U2H3
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All DBs
Position
sgr07:21894283..21912496
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AA seq
1362 aa
AA seq
DB search
MEMVPSDENQFVPKEIQNAAEEPRVLCIIQDTTSAKTVNERLTLNLPASTTLSKLHEDVA
HKAGYVNDTFDLTWANITDMAPLEHNSEMSLSDSGFEPGKKNFLQLTDKDGEQPRVVSEE
SGTADSSGLDDSSQERFIGPLQRDGSACGSGDYSSPSYSYSSILSKSDTGYVGLVNQAMT
CYLNSLLQTLYMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGY
ESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARKG
LRFLHLPYLLTLQLKRFDFDYTTMHRIKLNDRMVFPEELDMSPFIDVEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSTERALKPKSLLTFELFSVMVHSGSA
AGGHYYAYIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYML
IYRLKDLSRNTKFLAVEDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVKM
MVESKLEVHKDRTLREATEMAYKLMELEGAVSLDCCRLVKYDEFHEYLERSYEGEEDTPM
GLLLGGVKSSYMFDLLLETRRPEQVFQPYKPGEVMVKVFIVDLKTETITPPVSVRAYLNQ
TVTEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSELA
DHQVVFTDSLLWKLLDRHGNTIRLFVLLPEQSPGALTNRTVCQKAGEDTDGPLEGSKGNR
KSVEAILEESTEKLKNLSLQQQGSSTSDSQKSPDTSDFEHIESPTQEAHSNSSLCVAADN
RGLENRIRATPGSSGGASSDTENPFVCEERSDSEVNNDRSTSSVDSDILSSSHSSDTLCN
ADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKAEAQYLY
FRAEPFSQDEASWETQKCLVVHVDKRITLAAFKQKLEPYVGVVSSQFKVFRVYANNQEFE
SVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLMVNEPEPCKFLVDTVFAKGMTVR
QSKEELLPQLKEQCKLDLSVDRVRLRKKTWKNPGTVFLDYHIYEEDISISSNWEVFLEVL
NDPEKMKSMSQLAVLTRRWSPATMKLGPFQEVILESSSVDELKEKLSEVSEVPLENVEFA
KGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSREEPLELSEDERN
ELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPVRDPGQD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgatgagaaccagttcgtacccaaagagatccagaatgcggcc
gaggagcccagagtgctgtgtataattcaggacaccaccagtgcaaaaacggtcaacgag
aggctgactctcaacctgcctgcttccactactctttccaaacttcatgaggacgttgca
cacaaagccggatatgtgaatgacacctttgacctcacctgggcaaacattacagacatg
gcaccgctggaacacaacagtgagatgtccctctcagattctgggtttgagcccggtaag
aaaaatttccttcagctcacagataaagatggagagcagccacgggttgtgtcggaagag
tcaggaacagcggacagcagcggactggatgacagttctcaggagcgttttattgggcct
ctacagagagatggcagtgcatgtggcagcggcgactacagcagtccatcctactcctac
tcgtctattctcagcaaatctgatacaggttatgttggcttggttaaccaagctatgacg
tgctatttgaacagtctcctgcaaacactttacatgaccccagaattcagaaatgcgctc
tacaactgggagtttgaagagtcagaggaggatccagttaccagtattccctatcagctg
caaagactgtttgttctgctgcagaccagtaagaagcgagcgattgagaccactgatgtg
acgcggagcttcggctgggatagcagcgaggcttggcagcagcatgatgtccaggagctg
tgcagagtcatgtttgatgccctagagcagaagtggaagcagactgaacaggctgatctg
atcaaccagctgtaccaaggaaagctgaaggattacgttcgctgtttggagtgtggctac
gagagctggagaattgatacttacctggacatccctctggtgatcagaccctttggagcc
agccaggcctacgggagtgtggaggaggctttgcaggcattcatccagccagaaactctg
gatggacccaaccagtacttctgcgaacgctgcaaaaagaagtgtgacgcgcgaaagggt
ctgagatttctgcaccttccttacctgctgaccttacaactgaaaaggtttgattttgac
tacaccaccatgcatcgcatcaagcttaatgaccgcatggtgttccccgaggagctggat
atgagtccattcatcgatgtggaagatgagaagtcacctcagacagagagctgtactgat
agtggagcagagaatgaaggcagttgccacagcgaccaaatgagcaatgacttctccact
gatgactgtgtggatgagggcatctgcttggacagcaccagcagcacggagagggcgctg
aagccaaagagcttgttgacctttgagctgttctccgtcatggtccattcagggagcgct
gctgggggccactactatgcttatatcaagtctttcagcgatggccagtggtacagtttc
aacgatcaacacgttagcaagatcacccaggatgatatcaggaagacatatggggggtca
tcggggagcagaggctattattctagtgcctttgcaagctcgacaaatgcgtacatgctg
atttatagactgaaagacctctcaaggaatacgaagtttctagctgtggaagatttccca
gagcacataaagagtttggttcagaaggagaaagagtctgaagagcaagagaaacgccag
agggagatcgaacgcaatacttgcaagatcaagcttttctgcatgcatcctgtgaagatg
atggtggagagcaagctggaagttcacaaggacagaactctcagggaagcgacagaaatg
gcctacaagctgatggagctggaaggagccgtctcactggactgctgtcgcttggtgaag
tatgatgagttccacgagtatctggagcgatcgtatgaaggggaggaagacactccgatg
gggctcctcctcggcggagtcaagtcctcgtacatgttcgacctcctgctagagacacgc
aggccagagcaggtgttccagccttacaaacctggagaagtgatggtgaaggtttttatt
gttgatctgaagaccgagaccattacccctccagtcagcgttcgagcgtacctgaaccag
acagtcaccgagttcaaacagcttattgcacaggctacggggctttctgcagagaccatg
cgagtggtcttggagcgctgctataatgacctccggcttctctatgttccaaataagacg
cttaaagctgaaggattcttcaggagtaacaaggtttttgtggagagctctgagttggcg
gatcatcaggttgtgttcactgactcactcttgtggaaactgttggatcgtcatgggaat
acgatccggctgtttgtcttactacctgaacagtctcctggtgctctgaccaatagaact
gtttgccaaaaggcaggagaagacaccgacggtcccttagaggggtcaaagggcaacagg
aaatctgtggaagctatcctggaggaaagcacagaaaagttaaagaacttgtctctgcag
cagcaaggctccagcactagcgacagccagaaaagtcctgacaccagcgactttgagcat
attgaatccccgacccaagaggcccactcaaactcttctctgtgcgtggccgcagacaac
agagggttggagaaccggatcagagccacgcccggcagcagcggaggggcctcctccgac
acagagaacccatttgtttgcgaggaacggtcagactctgaggtgaacaatgatcgtagc
acaagctcagtggacagtgacatcctgagctccagccacagtagcgacacgctgtgcaac
gccgacagcggccccattcagctggccaacggcctggattcacatagcatcacaagtagc
cgacgctccaaagctcacgaaggcaaaaaagagacgtgggacacagctgaagaggactcc
gggacggacagcgagtacgacgacaacgggaagagcaaagcagaagctcagtacctgtac
ttcagagcggagccattttctcaggacgaagcttcgtgggaaacacaaaaatgtctagtg
gtccacgtggacaagaggataacattagcagcattcaaacagaagctggagccttacgta
ggagtagtgtcgtcccagttcaaggtgtttcgggtttatgccaacaaccaggagtttgag
agcgtacggctgaacgagacactctcgtccttctctgatgataacaagattactattcga
ctcggaagagccctgaaaaagggtgaatacagagttaaagtgtatcagctcatggtgaat
gaaccagagccctgtaagttccttgtggacacggtgtttgccaagggcatgactgtcaga
cagtccaaggaggaactgcttcctcagctaaaagagcagtgtaagctagacctcagcgtc
gacagagttcgtctcaggaaaaaaacctggaagaatccaggcaccgtctttctggattac
cacatctacgaggaagacatcagcatttcctccaactgggaagttttcttggaagtcctt
aatgacccagagaagatgaagtccatgtctcagctagctgttctgactcgaaggtggagt
ccagctacgatgaaactgggacctttccaggaggtgattctggagagcagcagtgttgac
gaactcaaagagaagcttagtgaagtcagtgaagttcctcttgagaatgtggagtttgca
aagggtagaggaactttcccgtgtgatatatccgtgctggagatccatcaggatttggac
tggaaccccaaggtgtcgactctcaacgtgtggcctctttacatctgtgacgacggagcc
gtggtgttctacagggacagcagggaagaacctctggagctctcggaggatgagcgtaac
gagctcatgaagaaggagagtagtcgactgctcaaaacaggacatcgtgtcagctactct
cctcgaaaagaaaaggctctcaagatctacctggatggcggccccgtgagagacccggga
caggactga
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integrated database retrieval system
