Nothobranchius furzeri (turquoise killifish): 107385992
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Entry
107385992 CDS
T05163
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107385992
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107385992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
zf-RING_10
LMBR1
LRIM1_dimer
Motif
Other DBs
NCBI-GeneID:
107385992
NCBI-ProteinID:
XP_015815625
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All DBs
Position
sgr11:complement(11166874..11169122)
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AA seq
573 aa
AA seq
DB search
MIRAQECFIYQEVKLAQSLRGEMAQKGVQLDTESFCCSICLDLLKDPVTIPCGHSYCMKC
IGKVWDKEDQNQIHSCPQCRKSFTPRPVLEKNILLAALVEQLKTTGLQAAPAGHSYAGAE
DVACDVCTGRKLKATKSCLTCLMSFCENHLQRHLYVAQLRKHQLVEPSKKLHENICSRHD
EVMKMFCRTDQQSICYVCMVDEHKSHDIVSAAAERSEKQKELEVKRENIHQRIQEREKDV
KLLQQEVEAINVSADKTVEDSEKIFTQLISQIQKRSSEVKQQVRSQQEAEVSRVKDLQEK
LEQEITELKRKDAELKQLSNTEDHNQFLHNYSSVSAVRESPHSSSIRVRPLRHFKDVTAA
VSELRDKLQDILRDTWTNISLRVTEVDVLLPEPTTRDDFLKYSCEITLDPNTAHNWLKLS
KGNRKATFMRKSQFHPDHPDRFTVPYQVLSLESLTGRCYWEVKWEGRGGYVAVAYKDVDK
IKPGFGYNNKSWALYCNNNKNVFWHNNISTPISGSGSSRVGVYLDHRAGILSFYSISENM
TLLHRVQTTFTQPLHVGIQFFNFGDSAEICKLK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagctcaagagtgtttcatttatcaggaagtgaaacttgctcagtcactgaga
ggagaaatggcgcagaaaggagttcagctggacacagaaagtttctgctgttccatctgt
ctggatctcctgaaggatccggtgactattccctgtggacacagctactgcatgaagtgt
attggaaaagtctgggataaagaagatcagaaccagatccacagctgtcctcagtgcagg
aaaagcttcacaccgaggcctgtcctggagaaaaacatcctgttagcagctttagtggag
cagctgaagaccactggactccaagctgctcctgctggtcacagctatgctggagctgaa
gatgtggcctgtgatgtctgcactggaaggaaactaaaagccacaaagtcctgtttgacg
tgtttgatgtctttttgtgagaatcacctgcagcgtcatttgtatgtggctcagttgagg
aaacatcagctggtggagccctccaagaagctccatgagaacatctgctctcgtcacgat
gaggtgatgaagatgttctgtcgcactgatcagcagagcatctgttatgtctgcatggtg
gacgaacataaaagccacgacatcgtctccgctgcagcagaaaggagcgagaagcagaag
gagctggaggtgaagcgagaaaacatccatcagagaatccaggagcgagagaaagacgtg
aagctgcttcagcaggaggtggaggccatcaatgtctctgctgataaaaccgtggaggac
agtgagaagatcttcactcagctgatcagtcagatccagaaaagaagctctgaagtgaag
cagcaggtccgatcccagcaggaagctgaagtgagtcgagtcaaagatcttcaggagaag
ctggagcaggagatcactgagctgaagaggaaagacgctgagctgaagcagctctcaaac
accgaggatcacaaccagtttctacacaactactcctcagtgtcagcagtccgtgagtct
ccacactcatccagcatcagggttcgtcctctgagacactttaaagatgtgacagcagct
gtgtcagagctcagagacaaactacaggacatcctgagggacacgtggacaaacatctca
ctgagagtcactgaggtggatgttttactgccagaaccaacgaccagagatgatttccta
aaatattcatgtgaaatcactctggatccaaacacagctcacaattggctgaagttatca
aagggaaacagaaaagcaacatttatgaggaaatctcagtttcatcctgatcatccagac
agattcacagttccatatcaggttctgagtctagagagtctgactggacgttgttactgg
gaggtaaagtgggaaggaagaggaggttacgtagcagttgcgtacaaggatgttgataaa
ataaagcctggatttggatataataacaaatcctgggctttgtactgtaacaataacaaa
aatgtgttttggcacaacaacatcagcactcccatctcaggttctggttcctccagagtt
ggagtctacctggatcacagagcaggtattctgtctttctacagcatctctgagaacatg
actctcctccacagagtccagaccacgtttactcaaccgctccatgttggaatacagttc
tttaactttggagactcagctgagatctgtaaactaaaataa
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