Nothobranchius furzeri (turquoise killifish): 107387013
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Entry
107387013 CDS
T05163
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107387013
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107387013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
zf-RING_10
ALS2CR8
TolA_bind_tri
DUF4407
PI3K_P85_iSH2
DivIVA
LMBR1
Motif
Other DBs
NCBI-GeneID:
107387013
NCBI-ProteinID:
XP_015817233
UniProt:
A0A9D2XQL6
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Position
sgr11:complement(36398908..36416686)
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AA seq
617 aa
AA seq
DB search
METEWLRGPSLRILTFPEMSRNSYSGNMTFGSDWILECTTMADHTSPDYFSCSLCANLLK
DPVAIPCGHSFCMDCISGYWNEADYTGIYICPQCKITFTQRPVLRPNATLSMVAEKIKKS
GLNISLSTSQGNVYAGPTDVPCDFCTGKKLKAVKSCLNCLASYCEKHLRPHYESATFKRH
KLVDELGNLDRKICPQHQKSLELFCRTDQMCICALCTVSEHRGHDIVSAEAERGEKQKLL
GVSQTEIRQKCQERMKELEELKTAVDSLKNSAQRAMVESQKMFEDMIRSIERMRSEVTKL
IGINEKAAFNQAETLIERLEQEIDELKKKESGLKQLYSTEDHIHFLQNFNYLCTPTDDGF
IPKVTVNPDFSFGAVRKAVAEIKERLEEFGREELLKISKTVNEVPVYTTESRTLERRSRG
KEMTSMVVDNTPPPEPKTRAEFLKHFCQLKLDPSTAYKELYISDNYRKVIRTRDLQPYGD
NPERFDSFAQVLCREALSGGRFYWEIEWSGEFSIGVAYKGISRKGKGSLCLLGYNDKSWS
LLCSDSGYSAWHNRVDKPVSGPHSSRIGVYLDHTAGVLAFYSIGSSMTLLHRFITTFVEP
VYPGFGVGTSVKICNLK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaatggctgagaggaccaagcctgcgcatactcaccttcccagaaatgtcc
cggaactcctacagtggaaacatgactttcgggtctgactggattttggagtgcaccacc
atggctgatcacacatctcctgattacttcagctgctccctgtgtgcgaaccttctcaag
gaccccgtggccatcccctgtggccacagcttctgcatggattgcatcagcggctactgg
aacgaggctgattacacggggatttacatttgtccccagtgtaagatcacattcacccag
aggcccgtgctgcggcccaatgccacccttagcatggtggctgagaagatcaagaagagc
ggcttgaacatcagcctgagcacgtcccagggaaatgtctacgccgggccaaccgacgtc
ccgtgtgacttctgcaccggaaagaaactaaaagctgtgaagtcctgcctgaactgtctg
gcatcttactgcgagaagcacctgaggccgcattacgagtcggccaccttcaaaaggcac
aagctggtggatgaattgggaaacctggacaggaagatctgcccgcagcaccagaagtcc
ttggagcttttctgtcgaacggatcagatgtgtatctgtgctttgtgcacagtcagcgaa
cacaggggccacgacatagtgtccgctgaggcagagagaggcgagaagcagaaactgttg
ggagtctctcaaactgagataagacaaaaatgtcaggaaaggatgaaggagctggaggaa
ctcaagactgctgtggattcactgaagaactcggctcagagagccatggtggagagccag
aagatgtttgaggacatgatccgctccatcgagaggatgaggtcagaggtgaccaagctg
attggtatcaacgagaaggctgctttcaaccaagccgagactctgatcgagcggctggag
caggagatcgatgagctgaagaagaaggagtccggcctcaagcagctgtacagcaccgaa
gaccatatccactttctgcagaacttcaactacctctgcacccccactgatgatggcttc
atacccaaagtgacagttaaccccgacttctccttcggagcggtcaggaaggccgtggca
gagattaaggagcgcctggaggagtttggcagggaggagctgcttaaaatttccaagaca
gtgaacgaggttccggtctacactacagagagcagaactctggaacgaaggagcagaggc
aaagaaatgacatcgatggtggtggacaacacaccgcccccagagccaaagaccagagca
gaatttctcaaacacttctgccagctgaaactggaccccagcacagcctacaaagagctc
tacatctctgataactacagaaaagtcatccgcaccagggacctgcagccctacggggac
aacccggagaggttcgacagctttgcccaggtgctttgcagggaggcgctgtccggaggc
cgcttctactgggagatcgagtggagtggggagttctccattggagtggcctacaagggc
atcagccgaaagggcaaaggctcgctgtgcctgctgggctacaacgacaaatcctggagc
ctcctgtgttccgactcaggttactccgcctggcacaaccgggtggacaaacccgtcagc
ggcccccactcctccaggataggtgtgtacctggaccacacggcaggcgtgctggccttc
tacagcatcggcagctccatgaccctcctgcacaggttcatcaccacattcgtggagccc
gtctatccaggttttggagtcggaacctccgtcaagatctgcaacctcaagtga
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