Nothobranchius furzeri (turquoise killifish): 107387285
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Entry
107387285 CDS
T05163
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107387285
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107387285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
Remorin_C
BshC
DUF6468
Tweety
Motif
Other DBs
NCBI-GeneID:
107387285
NCBI-ProteinID:
XP_015817656
UniProt:
A0A1A7ZL98
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Position
sgr12:8694549..8705486
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AA seq
621 aa
AA seq
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MTEPGPGPELTSSSNPQQCASCSGKMTGDQLTCGHSVCVSCLGDKSCPTCLKNPAEPDPE
NGLRQNGAAERKEDLGQEEDSTPEQIRTQADLNESDPQKPEVDRKTAETEQHVQTVEQKE
EPLGPNDVVCDSCIESPRRALKSCLTCLVSYCEAHLRPHLENPKFQNHRLVEPLGDIERR
TCESHKWPLELFCSADGSCICQDCVTEEHRGHTAVPVGEARRRIEKELKEKQTDVGKTVT
AAENAINKLQANTVSIEHSVTEVRAVIEAQFQELQVKVERAKKEVTEILEGEESQALKQA
EGIRAHLEQRCSDLKKTQAQMEKLSKNQNDVDFLQEYANWKKDAADGSLPGIYIGLMDRL
DSFSQVVIESTQELCDILMSSYIEKVKGTCKNDKMGIKTTVHAKRNRFLPDPKTRDDFLK
YSSQLSFDGETAHKFLRLTEENRKVTNTTPWQHPYPDVPERFEHHRQVLAAESFYLDRHY
FEADISGDGVHIGLTYKSVDRKGSESNSCITGNNFSWCLQWNGRTFSAWHSDVETPLNVE
RFPRIGVYVDYPRGLLAFYGVGDTMTLIHKYEAEFLEPLYPAFWLSKKENVVALVSPGEL
LPLKSPSPPTPPLNEAVVAQT
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccaggaccgggaccggaactaaccagctccagcaacccgcagcagtgcgcg
tcctgctcaggtaagatgaccggagaccaattgacctgtggacactctgtctgtgtctcc
tgcctcggagacaaaagctgtccgacgtgtctaaagaatcccgcggaaccggatcccgag
aacggcctcagacagaacggagcagctgagcggaaagaggacctgggtcaggaggaggac
tccacaccagaacaaatcagaacgcaagcagacctgaatgagtccgatccccaaaaacca
gaggtggaccggaagacggcggagacggaacagcacgtccaaactgtggagcagaaggag
gaacctttgggtcctaacgatgtggtgtgtgactcctgcatcgagagtccccgcagggct
ctcaagtcctgcctcacctgcttggtttcgtactgcgaggcccacctgcggccccacctg
gagaaccccaagtttcagaaccaccggctggtggagccgctcggggacatcgagaggcgg
acctgtgagagccacaagtggcccctggagctgttctgctccgctgatgggtcctgcatc
tgtcaagactgcgtgacggaggagcaccggggccacactgcggtcccggtgggggaggcc
cggagacggattgagaaagagctgaaggagaaacaaaccgatgtggggaagaccgtgaca
gcagcggaaaacgccatcaacaaactccaagccaacaccgtttctattgagcattcagtg
acggaagtccgagctgtgatcgaagctcagtttcaggaactgcaggtgaaggtggagcgg
gccaagaaggaggtgacggagatcctggagggcgaggagagccaggcgctgaagcaggcc
gagggcatccgggctcacctggagcagaggtgctctgaccttaagaagactcaggcccag
atggagaagctctccaagaatcagaatgatgtggacttcctgcaggagtatgccaactgg
aagaaagacgctgctgatggctctctgcctgggatctatatcggcctgatggatcgcctg
gactccttcagccaggtggtcattgaatccacacaggagctctgtgacatcttgatgtcc
tcctacatcgagaaggtcaaagggacgtgtaaaaatgacaaaatggggataaagacaaca
gttcacgccaaacgaaacaggtttttaccggatccaaagacacgagatgacttcctgaaa
tattcttctcagttgagcttcgatggtgaaactgcccacaagttcctccgtctgactgag
gagaacaggaaggtgaccaacaccacaccctggcagcatccttatcctgatgtaccggag
aggtttgagcaccatcggcaggttctggcggcagagagcttctatctggaccgccactac
tttgaagcggacatcagcggggatggagtgcacatcggcctgacctacaagagcgtcgac
cgtaaggggagcgagagcaacagctgcatcacaggcaacaacttctcctggtgtctccag
tggaatggacgcaccttctcagcctggcacagtgatgtggagactccactgaatgtggag
aggttccctcggattggggtttacgttgactacccacgaggcctcctggctttctatgga
gtgggtgacaccatgaccctcatccacaagtacgaggcagaattcctcgagccgctctac
ccagctttctggctgtccaagaaggagaatgttgttgccttggtgtcacctggggagctt
ttacctctgaagagcccctcccctcctacgccacctctcaacgaagctgttgttgcacaa
acctaa
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