Nothobranchius furzeri (turquoise killifish): 107387741
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Entry
107387741 CDS
T05163
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04150
mTOR signaling pathway
nfu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107387741 (lrp6)
04150 mTOR signaling pathway
107387741 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107387741 (lrp6)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
107387741 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
SGL
EGF
Motif
Other DBs
NCBI-GeneID:
107387741
NCBI-ProteinID:
XP_015818383
UniProt:
A0A1A7ZZ82
LinkDB
All DBs
Position
sgr01:96327631..96373788
Genome browser
AA seq
1617 aa
AA seq
DB search
MGVALRSLLLCTFCCLIRGEPLLLYANRRDLRIADVAREKANATVVVGGLEDAAAVDYVY
SQGLIYWSDVSEEAIKRTSFSQSGASLVQTVVPGLTSPDGLACDWLGSKLYWTDSETNRI
EVAELDGSLRKVLFWQDLDQPRAIALDPQQGFMYWTDWGEVPKIERAGMDGTNRSIIIDK
EINWPNGLTLDYAQQKLYWADAKHNFIHRCNLDGSSREVVVKGELPHPFALTLFEDTLFW
TDWTTHSIHSCQKQTGNEQRIVHSNIFSPMDIHVFSPKRQPVSLSSSCSLNNGGCSHLCL
LSPTRPFFRCACPTGVQMREDGKTCRDGATQMLLLARRTDLRRISLDTPDFTDVILQVDD
IRHAIAVDYDPVEGYIYWTDDDVKAIRRSQLDGSDAQFVVVAQVSHPDGIAVDWIARNLY
WTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYLYWTDWGEVPKIERANLDG
TERVVMVNTTLGWPNGLALDYSELKIYWGDAKMDRIEVMNMNGTGRRVLVEDKIPHIFGF
TLLGDYIYWTDWQRRIIERVHKHTAEREFIIDELPDLMGLKAVNVHEAVGTNPCADNNGG
CSHLCLYTPHGVQCGCPIGLELIADMQTCIIPEAFLLFSRHTDIRRISLETNNNNVPIPL
TGVMEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVQFGLDYPEGMAVDWLGKN
LYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAM
DGTGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLDREVIADDLPHPFGL
TQFQDYIYWTDWSQRSIERANKTSGQNRTLIQGHLDYVMDILVFHSSRQGGWNACASTNG
HCSHLCLAVPVSNYVCGCPAHFSLNYDNKTCRAPTSFLLFSQKNSINRMVIDEQQSPDII
LPIHNLKNVRAIDYDPLDKQLYWIDSKQNVIRRTQEDGNQSMTVVLSSVVGPSPGLQLYD
LSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIMVNPERGYMYFTNLQE
RSPKIERAALDGTEREVLFFSGLGKPVALAIDNALGKLFWVDSDLRRIESSDLSGANRIV
IADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKTTREGRTKVQARVAYLSDIHAVHDLD
MTEYRKHPCTNDNGGCSHICIVKGDGTTRCSCPIHLVLLPDELTCGEPPTCSPEHFACNS
GEVDCIPNTWRCDGYPECDDRSDEEDCPVCSDSEFQCDSRQCIDLSLRCNGEINCQDGSD
ENKCEVRCPADQFTCTNGQCIGKHKKCDHNMDCSDNSDEMGCYPTEEPPPPSNNTISSIV
GVVMALFGVGAIYFVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHPSSLSSSLPG
MSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQY
TLEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKPAAATKGY
TSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYAHHLYPPPPSPCTDSS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgcgctgcggagcctgttgttgtgtactttctgttgtctaatccgaggtgag
ccgctgctcctgtacgcgaatcggcgagaccttcggatcgccgatgtggcgcgtgagaag
gccaacgccacggtggtggttggaggtctggaagatgcagcagcagtggattacgtctac
tcccagggcctcatctactggagcgacgtgagcgaggaggccatcaaacgcacctccttc
agccagtcaggcgccagcctggtccagactgtggtaccgggtctgacatcaccagatgga
ctggcctgtgattggttaggcagtaaactttactggacagactctgaaaccaatcggatt
gaagtggctgagctggacgggtccttgaggaaggttctgttctggcaggatctggatcag
ccgagggccatcgccctggatccgcagcaggggttcatgtactggaccgactggggggag
gttccaaagatcgagcgtgccggcatggatggaaccaatcgctccatcatcatcgataag
gagatcaactggcccaatgggctgaccctggactacgctcagcagaaactgtactgggcc
gacgccaaacacaactttatccaccgctgcaacctggatggctcctccagggaggtggtg
gtcaaaggggagcttcctcacccgtttgccctcaccctgtttgaggacacgttgttttgg
actgactggacaacccactccatccattcgtgtcagaagcagacaggaaatgagcaacgc
attgtccactccaacatcttctcacccatggacatccatgtcttcagccctaagaggcag
cctgtctctctgagcagctcctgctccctgaacaacggaggatgctcccacctctgcctc
ctgtctccaaccaggcccttctttcgatgtgcctgtcccactggagtccagatgcgagag
gatggaaagacctgcagagacggtgcgactcagatgctgctgctggcacggcggacagac
ctgcggcggatctctctggacactcctgacttcactgacgtcatcctgcaggtggacgac
atccggcatgccatcgctgtggactacgacccggtggagggatacatctactggactgat
gatgacgtgaaagccatccgtcgctctcagctggacggcagcgatgctcagttcgtggtt
gtggctcaggtgagccaccccgatggcatcgctgtggactggatagcccggaacctctac
tggacagatactggcacagaccgcatcgaggtgacccgactcaacggaaccatgaggaag
atcctgatctctgaggacctggacgagcccagagccattgttctggaccctgtggccgga
tacttgtactggacggactggggtgaggtaccgaagattgagcgggccaatctggatggg
acggagcgcgtggtgatggtgaacacgactctgggctggcccaacggcctcgcgctcgac
tacagcgagctaaagatctactggggagatgccaagatggatcggatcgaggtgatgaac
atgaacggaacgggccgacgggtgctggtggaggacaaaattcctcacatctttggcttc
acgctgctgggagactacatctactggacggactggcagcggcgcatcatcgagcgcgtc
cacaaacacaccgccgagagggagttcatcatcgacgagctgccagacctcatgggcctc
aaggctgtaaatgtgcacgaggccgtcggtaccaacccatgtgctgacaacaatggcggt
tgtagtcacctgtgcctctacacgccccacggggtgcagtgcggctgccccatcggcctg
gagctcatcgccgacatgcagacctgcatcatccctgaggccttcctgctcttctcccgc
cacaccgacatccgtcgcatctccctggagacgaacaacaacaacgttcccatcccgctc
actggtgtcatggaggcttcggcgctagactttgacgtcaccgacaaccggatctactgg
accgacatcaccctgaagaccatcagccgggccttcatgaatggcagtgctctggagcac
gtggtccagtttggcctcgactatccagagggaatggcggtagactggttggggaagaac
ctgtactgggcagacaccggcaccaaccgcattgaagtggccaaactggatggacagcac
cggcaagttctggtctggaaggatctggacagtccacgagctctggccctggatcctgca
gaggggtacatgtactggactgagtggggcgggaagcccaagatagaccgggctgcgatg
gacggtaccggccgcatcacattggtggccgacgtgggtcgagccaacggcctcaccatc
gactacgcggagcggaggctctactggaccgacctggacacgacgctgatagagtcatcc
aacatgcttggtctggacagagaggtgatcgcggatgaccttcctcacccgtttggactg
acccagttccaggactatatttactggacagactggagccaacgcagcatcgagcgagcc
aataagacgagtggccagaaccgcaccctgatccagggccacctggattacgtcatggac
atcctggtcttccactcgtcccgacagggcggctggaacgcctgtgcctccaccaacgga
cactgctcccatctgtgccttgctgtcccagtcagcaactatgtctgcggatgccccgcc
cacttctccctcaactacgacaacaagacgtgccgcgctcccacgtcattcctgctcttc
agtcagaagaactccatcaaccggatggtgatcgacgagcagcagagccctgacatcatc
cttcctatccacaacctgaagaacgtccgggccatcgactacgacccgctggacaagcag
ctgtactggatcgactccaaacagaatgtcattcgccgcacgcaggaggatgggaaccag
agtatgacggtggtactgagctctgtggtgggacccagtccaggtcttcagctgtatgac
ctaagcatcgacatctacagtcgcttcatctactggaccagcgaggtgaccaacgtcatc
aacgtgacccggacagatggcagccgggtgggcgtggtcctgcggggcgagcacgacaaa
cccagagccatcatggtgaacccagagcgcgggtacatgtacttcaccaacctgcaggag
cgttctcctaagatcgagcgggcagctttggacggcacggagcgggaggtcttgttcttc
agcggcctgggaaaacctgtggctctggccattgacaacgcgttgggaaagctgttctgg
gtggactcggacctgcggcgcatcgagagcagcgacctgtctggagccaatcggattgtg
atcgccgactctaacatcctgcagcccgtgggcctgacggtgttcgggaaccacctgtac
tggatcgacaagcagcagcagatgatcgaacgcatcgataaaacgacgagggagggccgc
actaaggtgcaggcgcgagtcgcctacctgagcgacattcacgccgtgcacgatcttgac
atgacggagtaccgtaaacacccctgtacaaacgataatggcggctgctcccacatctgc
atcgtgaagggagacgggacaacccgctgctcgtgtcccattcacctggtgctgctgcca
gacgaactcacctgtggagaaccgcccacctgctcgcctgaacatttcgcctgcaattca
ggagaagtggactgcatcccgaacacctggaggtgcgacggttatcctgagtgtgacgac
cggagcgacgaggaagactgtcccgtctgctccgattcggagttccagtgcgacagtcgg
cagtgcattgacctgagcctgcgttgcaacggggagatcaactgtcaggacggatctgac
gagaacaagtgtgaagttcggtgtccggcggatcagttcacctgcaccaacggtcagtgc
atcggcaagcacaagaagtgcgaccacaacatggactgcagcgacaactccgacgagatg
ggctgctatcccaccgaggagcctccacctccgtccaacaacaccatcagctccatcgtg
ggcgtggtcatggccttgtttggggttggtgccatctactttgtgtgtcagcgcgtgctc
tgtcctcagatgaaggacgacggagagacggtcaccaacgacttcgtggttcacgggccg
tcgtccgtgcctctgggatatgttccacatccgagctcgctgtccagctcgctgccaggt
atgtccagggggaagtctgtgattggctctctgagcatcatgggtggcagcagtggtccg
ccgtacgaccgcgctcacgtcaccggagcttcgtccagcagctcgtccagcaccaagggc
acgtacttccccccgatcctgaacccgcccccctcacctgcaacagtgcgctcccagtac
accctggagtttggttactcctccaacagcccgtccacacaccggtcatacagctaccga
ccgtacacctaccgccactttgccccgcccaccacgccctgcagcacggacgtgtgcgac
agcgattacaccccgggacgccgagcaccactgaagcccgctgcggccactaagggctac
accagcgacctcaactatgactctgagccgttcccgccgccgccgaccccccgcagccag
tatctgtcggcggaggagaactgcgagagctgcccgccgtcgccttacactgagcgcagt
tacgcccaccacctgtaccctccgccaccttccccttgcacagactcctcgtga
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