Nothobranchius furzeri (turquoise killifish): 107388491
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Entry
107388491 CDS
T05163
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107388491
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107388491
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107388491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
107388491
NCBI-ProteinID:
XP_015819548
UniProt:
A0A1A7ZPK2
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Position
sgr13:14010341..14121800
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AA seq
759 aa
AA seq
DB search
MGCNLCSLQKREEHYKLLYEIAQVNGKELSKSSHEDSVEAFHAAKDPVVVQVIRRTPSGR
PHGPPQEIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHAMDQDYY
DGTDYLPHVPADGERTEEFEYEEIELCRLSSLEKLGLTLCYRTDEEEDVAIYVSEVSPNS
IAARDGRIREGDRILQINGQDVLDREEAMAALSGDDCRNIILLVARPEIQLEEAWLDDEH
SEFLEQLKMEMLEEQQREEMELAALEEEQAKQQQREDEKPTCSTLPHYKGSAQSIKDRKE
SSDVLAQIQRRLSRCLRDSQDTHCVASTTRVEDKEDEDNDETDGDRYQQLLDLKCQIRNS
GDYDLFYSHRSTIECNIGEQNDVQHELRMLNEELRSIELECQNIMQAHQLRKGQQSPICG
RSGLTVKCLSPSRGESTKGKLTDTNERLEKSDKDSSSAYNTAESLRSTPLAMDRSPEHSL
KRMMSLTNQRNLCSSLATGHSLSLSPVPSCRVPVPGKGSSPDHSNPSETEEIAERDSRGK
LKQCTSRIPYFSPSHSSQQRQANIPAHARHYQSYMQLIQQRSAVEYAQSQLSLLSVCKEP
QRPLNEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEERSGGMTTDDDAMSEMKM
GRYWSKEERKQHLVRAKEQKRRREFMQRSRLESLKENPQSSSEGCKEVSIIELSHKKMLK
KRNKKILDNWMTIQELMTHGTKAPEGAKVNNAFLSVTTV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcagtttacagaagcgagaggaacactacaagctgctgtatgag
attgcacaggtgaatgggaaggagttgtccaagtccagccatgaggactcagtggaggcc
ttccacgctgccaaggaccccgttgtggtgcaggtcatcagacgtacccccagtggccgc
cctcacggtccccctcaggaaatccatgtggtggatgtgtgcacacagactgacatcacc
tttgaacacatcatggctctggcaaaactccgaccttcgacccctcctgtgcctgacatc
tgtcccttcctgctctctgacagctgtcattctcttcatgcaatggaccaggattactac
gatggtaccgactacctcccccatgttccagctgacggagaaagaacagaggaatttgag
tatgaggaaattgagctttgtcgactcagcagtctggagaaattaggtctcactctgtgc
taccggacagatgaagaagaggacgtagccatctatgttagtgaggtcagtccgaacagt
atcgctgccagagatggacgcattcgagagggggatcgcatcttacagattaatggccaa
gatgtactggacagagaagaagcaatggctgccctgtccggtgatgactgcaggaacata
atcctactggttgcaagacctgagatacagctggaagaggcctggctggatgatgagcat
agcgagttcctggagcagctgaagatggaaatgctggaggagcagcagagagaggagatg
gaattagctgccttagaagaggagcaggcgaagcagcagcagagagaagacgagaagccc
acctgttcaactctccctcactacaagggcagtgcacaaagtataaaagacagaaaggaa
agctccgatgtcttggcccagatccagagacgtctttctcggtgcctgagagacagtcag
gacacgcactgtgtggccagcaccacacgggtagaggacaaagaagatgaggacaacgat
gagacggatggggatcgttaccagcagctcttggacttaaagtgccagatccgtaacagc
ggtgattacgacctgttctacagccatcgcagcactatcgagtgcaacataggggagcaa
aacgacgtacagcacgagctgcggatgctcaacgaggagctgcgcagcatcgagctggag
tgtcagaacatcatgcaggctcatcagcttcgtaagggtcagcagtctcctatatgtggg
cgctctggtctcactgtgaaatgtctaagccccagccgtggagagtccaccaaaggtaag
ctgactgacactaatgagaggctggagaaatctgacaaggacagttccagtgcctataac
accgcagagagtttacggagtacccctttagcaatggaccgctccccagaacactcactc
aagaggatgatgagtcttacaaaccagaggaacctctgcagcagccttgctacgggccac
tctctgagcctgagccctgtgccatcctgccgtgtcccagtcccaggaaaaggcagtagc
cctgaccacagcaatccctccgaaacagaagagatcgctgagagggacagtaggggcaaa
ttaaagcagtgcacatctcggatcccttacttctctccatcccacagttcccagcagagg
caggccaacattccagctcacgcccgccactatcagagctacatgcagctgattcagcag
cgctcggctgtcgagtatgctcagagccagctcagtctcctcagcgtctgcaaagagcct
cagagaccccttaatgagcccaaaatggagtggaaagtcaagatccgcagtgacggcacc
cgctacatcaccaagaggccagtgagagacaagatcctgcgggagagagccttaaagatc
aaagaggagaggagtgggggaatgaccacggacgatgatgcaatgagtgagatgaagatg
gggaggtactggagcaaagaggagaggaagcagcacctggtcagggcaaaagaacagaaa
aggaggcgagagttcatgcagcgcagtcggctggagagcttaaaggagaatcctcagagc
agcagcgagggctgcaaggaggtcagcatcattgagctgagtcacaagaagatgttaaag
aaacgcaataagaagatcttggataactggatgacgattcaggagctgatgactcacggt
accaaagctcctgagggagcaaaggtcaacaatgccttcctttcagtcactactgtataa
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