Nothobranchius furzeri (turquoise killifish): 107389385
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Entry
107389385 CDS
T05163
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
107389385 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107389385 (hdac4)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107389385 (hdac4)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107389385 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
107389385
NCBI-ProteinID:
XP_015820997
UniProt:
A0A8C6LGM8
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Position
sgr14:1944138..2135831
Genome browser
AA seq
1098 aa
AA seq
DB search
MLYQTSATKSMSSYTHQVDVSTAALPSQVPPTTTALLPMDLRVVDHPHPHHHQQPPFGLV
SQPHPTPTPSTACPASSESGSGPVIGHQETHLQQELVALKHKQQLQRQLLIAEFQRQHEQ
LSRQHEVQLQEHIKHQQDLLALKHQQELLEHHRKMEQQRHEQQLEKQQREQKLQQLKNKE
RGQESAVASTEVKMRLQEFVLNKKKALAQRNLNHCLLSTPRYWYGKTQHSSLDQSSPPQT
ALSAYNHPVLGAYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRKDGPISTAK
KRPLDVADSACSSAPGSGPSSPNNSSSHIPSENGIPNSSSPGEVALLQRLAMRDGSVSQL
SLYTSPSLPNITLGLPATGPAGAVVSGHQDGESPLALPALQQGIPVTPAFLPTSHLPSYL
APSALDREGPGGGTAGHNALLQHMVLLEQSHGPVVGLGGLPMTSPTVSKLVRGHRPLGRT
QSAPLPQQPCGQTQALQQLVVQQQHQQFLEKHKLFQQQHIINKIMSKPGDQVSPPGSGAA
VPSRHHQSHPEETEEELREHQGLSSSSSTSSSSSVPETGSMRGLVIKQEPLDLQEQEERE
QRERQVEQDFLFNQQALLLEQQRIHQLRNYRASIEAAGLPVSIAVHRPLSRAQSSPASAS
FPIVVPEPPVKHQFTTGLVYDSLMQKHQCICGNATIHPEHAGRIQSIWSRLQETGLRSRC
ECIRGRKASQEELQTVHSEAHVLLYGTSPLRQKLDGSVNSVFVRLPCGGVGVDSDTIWNE
VHSSAAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKL
LQQRLNVSKILIVDWDVHHGNGTQQAFYADPSVLYLSLHRYDDGNFFPGSGAPDEVGSGA
GEGFSVNIAFTGGLEPPMGDAEYLAAFRTLVMPIANEFAPDMVLVSSGFDAVDGHAPPLG
GYKLTAKCFGYLTRQLMALAGGRLVLALEGGHDLTAICDASEACISALLGNELDPISYEV
LQQRPNANAVHSMEKVVEIHGKYWRSLQRSASTLGCSLSEALQRDTEEAETVSAMASLSV
ANKHKRSEEEPMEEEALI
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgctctatcaaacatcagcaactaaaagtatgtcctcctacactcaccaagtggatgtg
agcacggcagcccttccctcgcaggttccccccaccaccacagccctcctccccatggac
ctgcgcgttgtggaccatcctcacccccaccaccaccagcagccgccctttggcctggtg
tcccagccccaccccacaccgaccccctccacagcttgtcctgcatcttccgagtcgggc
agtggaccggtcatcggccaccaggagacacatctgcagcaggagctggtggccctcaaa
cacaagcagcagctccagaggcagcttctgattgcggagtttcagaggcagcatgagcag
ctgtcgcgacagcatgaagtccagctgcaggagcacattaagcatcaacaggatctactg
gctcttaagcaccaacaagagctgctggagcatcacaggaagatggagcaacagcgtcat
gagcaacagctggagaagcagcagcgggagcagaaacttcagcagctgaagaacaaggag
aggggacaagagagcgccgtggccagcactgaggtaaagatgcgactgcaggagtttgtc
ctgaacaagaagaaagccctggctcagcgaaacctaaaccactgcctgcttagcacgccc
cgctactggtatgggaaaacgcagcacagctctttagaccagagctcaccccctcagacg
gcactatcagcatacaaccatccagttctgggtgcatatgactctaaagacgacttccca
ctacgaaaaactgcgtccgaacccaacctgaagcttcgctcccggctaaaacagaaggtg
acggagcgccggagcagcccacttctccgcaggaaggacggacccatcagcactgccaag
aagcgacccctggatgtagctgactctgcatgcagcagtgcaccaggctcaggtcccagt
tctcccaacaacagctccagccacatccccagtgagaatgggatccccaactccagcagc
ccaggagaggtcgccctccttcagaggttggctatgcgggacggttcggttagccagctg
tcactctacacgtctccttctctgcccaacatcaccctgggactgccagccactggtcct
gccggcgctgtggtatcgggacaccaagatggcgagagtcctctggcgctgcctgcgtta
cagcagggcattccagtgacccctgcttttcttcctacttcccacctgccttcatacttg
gcaccttcagcactggacagggaggggcctggagggggcacagctggtcacaacgccctc
cttcagcacatggtactactggagcagagccacggtccagtggtgggtctgggtggctta
cccatgacgtcaccaactgtctccaagctggttcgaggccaccgccccctgggaagaacc
cagtcggctcctctgccccagcagccgtgtgggcagacccaggccctgcagcagctggtg
gtccagcagcaacaccagcagttcctggaaaagcacaaactattccagcagcagcacatc
atcaacaagatcatgtccaagcccggcgatcaggtgtcgcctccaggatctggtgcagcg
gtaccaagtcggcatcatcagagtcacccagaggagacggaagaggagctcagggagcac
caagggctgtcctcatcctcctccacatcctcctcttcatcagtgccagagacagggtcc
atgagggggctggtcatcaagcaggaacctcttgacctccaagagcaagaggaaagggaa
cagagggagaggcaggtggagcaggacttcctgttcaatcagcaggcgttgctcttggag
cagcagcgcatccatcagttgaggaactacagagcctccatagaagctgcagggttaccc
gtcagcatcgctgtccaccgtcctctgtcccgggctcagtcgtctccagcctccgcttcc
ttccccatcgtagtcccggagccgcctgtgaagcatcagtttactacaggtctggtgtat
gactctttgatgcagaagcaccagtgcatctgcggcaacgccaccatccatccagagcac
gccggtcgtattcagagcatctggtcccggctgcaggaaacgggcctccggtctcggtgt
gagtgtatccgtggccggaaggcctcgcaggaggagttacagacggttcactcggaggct
cacgtcctactgtacggcaccagcccactgaggcagaagctggacggttcggtgaactcc
gtgtttgtgaggttgccgtgcggcggcgtcggggtggacagcgacacgatttggaacgag
gtccattcgtccgctgctgctcgtctggctgtcggctctgtggtggagctcgttttcaaa
gtagcatcgggagagctgaagaatggcttcgctgtagttcgcccacctggacaccacgct
gaggagagcacacccatgggcttctgttatttcaattctgtcgccgtagcagccaagctc
ctgcagcagaggctgaacgtcagtaagatcctcatcgtggactgggatgtccatcatggt
aatggcacccagcaggccttctacgccgacccgagtgtcctctacttgtccctgcatcgc
tacgacgacgggaacttcttcccaggcagcggggcacctgacgaggtgggcagtggtgca
ggtgagggcttcagcgtgaacatagcgttcaccggaggcctggaaccgcccatgggggac
gcggagtatctcgctgcattcaggacgttggtcatgcccatcgccaatgagtttgcccca
gatatggttctggtgtcgtctggctttgacgcggtggacggacacgccccgcccctggga
ggatacaaactgacagccaaatgctttggctacctgaccaggcagctgatggcgctggcg
ggcggtcgcttggtgctcgccctggaggggggtcacgacctcacggccatatgtgacgcc
tctgaagcctgcatctctgctctgctcggcaatgagttggaccctatttcatatgaggtg
cttcaacagagaccaaacgccaacgctgttcactcgatggagaaagtcgtcgaaattcac
ggtaaatactggcgttcacttcaacgctccgcctccacacttggctgttcgttgagcgaa
gcgctgcagcgggacaccgaggaggccgagaccgtctccgctatggcttcgctgtccgtc
gctaacaaacacaaaagaagtgaagaggaaccaatggaagaagaggctttgatttaa
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integrated database retrieval system