Nothobranchius furzeri (turquoise killifish): 107390424
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Entry
107390424 CDS
T05163
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
nfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107390424
03015 mRNA surveillance pathway
107390424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107390424
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107390424
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107390424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107390424
NCBI-ProteinID:
XP_015822596
UniProt:
A0A9D2XVQ7
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Position
sgr15:complement(5956491..5962248)
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AA seq
457 aa
AA seq
DB search
MSDCNVKEDLNANIGPKKNRSVDMDDGQGDKAELAEQSLLNKLIHRSLVINQNQVEVMQA
DPSSPLFSVKTFEELRLKPELLEGVYSMGFNRPSRIQESALPLMLAQPLQNLIAQSQSGT
GKTAAFCLAMLSHVNPANQWTQCLCVAPTYELALQTGQVIEQMGKFCPDVKLAYAVRGTK
AVRGSRLQEHIVVGTPGTVLDWCTKYKMIDPKKISIFVLDEADVMINMQGHRDQSIRIHR
QLSEDCQMLLFSATFEDSVLQFAKRVVPDPNIIKLKREEETLDTIKQFYVVCSGKEDKFN
SLCNLYGCLTIAQTVIFCHTRKMASWLAASLTTEGHQVALLSGEMMVDQRAAVIERFRNG
KEKVLVSTNVCSRGIDVAQVTLVVNFDLPVNMKGDADNETYLHRIGRSGRFGKRGFAVNM
VDSEEDMVVLKQIEEHFGRKITKLDTSELEQMEMLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattgcaacgttaaagaagatttaaatgccaacatcgggcctaagaagaacaga
agtgtagacatggacgacggacaaggggacaaagcggagctggctgaacagtccctgctg
aacaaactgatccaccgctctctggtgatcaaccaaaaccaggtggaggtcatgcaggca
gacccctcctcccccctgttctccgtcaagacctttgaggagctcagactgaaacctgag
ctgttggaaggtgtttacagcatgggtttcaacaggccatcaagaatccaggagagcgct
ttgcctttgatgctggctcagccactgcagaatctgatcgctcagtctcagtctggtacg
ggtaaaactgctgccttctgcctggccatgctcagccatgtaaatcctgccaatcagtgg
actcagtgtctgtgtgtcgctccaacatatgagctagccttgcagaccggccaagtgata
gagcagatggggaagttctgcccagatgtaaagctggcatatgccgtccgagggacaaaa
gccgtgagagggagcaggctgcaggagcacattgtggttggaacaccagggacggttctg
gactggtgcacaaagtacaagatgattgaccccaagaagatttccatctttgtgctggat
gaagctgatgtgatgatcaacatgcagggccatcgggatcagagtattcggatccacagg
cagctaagcgaagactgtcagatgctgcttttctctgcaacattcgaggactctgtgttg
cagtttgcaaagagagtcgttcctgatcctaacatcatcaagctgaagcgggaagaggag
accctggacaccatcaagcagttctatgtagtctgcagtgggaaggaggacaagttcaac
tctctctgtaatctgtacggatgcctgacgatcgcacagactgtgatcttctgccacact
agaaaaatggcttcctggctggctgctagtctgaccactgagggtcaccaggtggcgctg
ctgagcggtgagatgatggtggatcagagagccgctgtgattgaacgtttcaggaatggt
aaagagaaggtgctcgtgtctacaaacgtgtgttccagaggtattgatgtggcgcaggtg
acccttgtggtcaacttcgacctcccagtgaacatgaaaggagacgctgacaatgagacg
tacctgcatcgcatcggccgctcagggcgctttggcaagcggggattcgctgtcaacatg
gtggacagcgaagaagacatggtcgtcctaaagcagatcgaggaacactttggccgaaaa
atcacaaaactggacaccagcgaacttgaacaaatggagatgcttttgaaatga
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