Nothobranchius furzeri (turquoise killifish): 107392657
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Entry
107392657 CDS
T05163
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107392657
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107392657
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107392657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
Pox_A_type_inc
zf-C3HC4
zf-RING_2
Endonuclease_7
zf-RING_UBOX
zf-Nse
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
107392657
NCBI-ProteinID:
XP_015826036
UniProt:
A0A1A8ANH6
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All DBs
Position
sgr17:complement(22564557..22598644)
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AA seq
552 aa
AA seq
DB search
MDLHRPFKMDSPSYLPAPLASPALMVLASTAEAGRDASVPCQAPRPFGVPASMEKDLHLP
FPSASYTFTSMYQRQAPMSGTFPSRDFPASLLHLHPQFTPPNLDCPTLGMLNHSGVGAFR
PFASPQEERESGGYQSAFTPAKRLKSCFLDLEGKEFDFGSLKAGEETGRKLFSMSGLLSD
GEASSSPEERKEHSKVKVLYDTQAPVCPVCQAVLRPGELQDHMEQELSKLAQLHISPVQQ
DLIMRTPKSLSLSLHIKREGGSPTSSPRPPEEPHSDRYQTFLRVRANRHTRLNVDDLCWC
RCYVKSAPLRPHSAGAHLECTQAVRVGKLKRRKPEDLQEGSADLVPLEDEWNERRRLPMT
SVGFKGVPLVSTTCKESRDSDADLDVDGDDTLEYGKAQYTEMDVIPCSAESSKESTVNSL
LPDSRLNPNFSKWSNEGYLGSPSTSGGEKQDGGLTILQKTCKNSEIETFSEDSTPTTLDT
LKTRIRDLEKQLSKGDRFKCLICMDTYTTPLTSIQCWHVHCEECWLRTLGAKKLCPQCNT
ITSPGDLRRVYL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaccgcccctttaagatggacagcccgtcctacctgccagctccactggca
tccccggccctgatggtcctagcctccaccgccgaggcaggccgagatgcctccgtcccc
tgccaggctcccagaccctttggggtccctgcctcgatggaaaaggacctccacctcccc
ttcccctcggcctcctacaccttcacctccatgtatcagcgccaggcccccatgtcgggc
acttttccatcccgagacttcccagcctccctgctccacctccaccctcagttcactcca
ccaaacctggactgcccaaccctgggcatgcttaaccacagcggtgtgggcgccttcagg
ccttttgcttccccgcaagaagagagggaatccgggggttaccagtcagctttcaccccc
gcgaagaggctgaagagctgctttctggatctagaggggaaggagtttgactttggctcc
ttgaaagccggggaggagacggggagaaagttgttctccatgtccggcctgctgtctgat
ggagaggcttcgtcgagtccagaggagcgcaaagagcacagtaaagtgaaggttctgtac
gacactcaggcccctgtgtgtccggtttgccaggctgtcctacgacctggagagctgcag
gaccacatggagcaggagttatctaaactcgcccaactacacatcagtccagttcaacag
gacctcatcatgaggacgccgaagtctttatcactctccctgcacatcaaacgagaagga
ggctctcccacctcgtctcctcgaccacctgaggaacctcactcagaccgataccagacg
tttctccgagtgcgagccaacagacacaccaggctaaacgtcgatgacctctgctggtgc
aggtgctacgtcaaatccgccccattgcgcccacacagcgcaggagcccacctagagtgc
acacaagctgtcagggtcggaaaactaaagaggagaaaaccagaagatctgcaggaggga
tcagcagacctggtgccactagaggatgagtggaatgagagaagacggttaccaatgaca
tctgtaggattcaaaggtgtaccgttggtgagtaccacttgtaaagagagtcgggacagc
gatgcagacctggatgttgatggagacgacaccttggagtacggcaaagctcaatacacg
gagatggacgtgatcccctgttcagcagaaagctccaaagagtcaacagtgaacagcttg
cttcctgattcgagactgaaccccaacttctccaaatggtcaaatgaaggttacttgggg
agcccgtctacgagcggcggggagaaacaggatggcggtctcaccattctccaaaaaacc
tgcaaaaactccgagatcgagacgttttcagaggattccacaccaacaacgctggacact
ctgaaaacccggatacgagacctggagaagcagctgtcaaagggagacaggtttaaatgc
ctcatctgcatggacacctacaccaccccgctcacctccatccagtgctggcatgttcac
tgtgaggagtgttggctgcggacgctgggagcaaagaagttgtgtccacagtgtaacacc
atcacctcacctggagacctgaggcgagtgtacctctaa
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