Nothobranchius furzeri (turquoise killifish): 107392679
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Entry
107392679 CDS
T05163
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107392679 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107392679 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107392679 (usp13)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107392679 (usp13)
Peptidases and inhibitors [BR:
nfu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107392679 (usp13)
Ubiquitin system [BR:
nfu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107392679 (usp13)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107392679 (usp13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
107392679
NCBI-ProteinID:
XP_015826065
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All DBs
Position
sgr17:21804031..21838910
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AA seq
863 aa
AA seq
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MAADLGELLVPYMPTIRVPKIGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETNHPLAVK
LDTITPDGADVYSFEEEEAVLDPHISEHLSHFGIDMLQMQKRTENGHHTDNNSRPRVSEW
EVIQESGMKLKMVYGSGYTGIKNLGNSCYLGTVLQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKLGHGLLSGQNSKPPMKSELIEQVMKEEHKVLNGHLQRGISPRMLKALV
SRGHPEFSSNRQQDAHEFLLHLINQVERNSAGSENPSDVFRFLVEERVQCCQTRRVRYTQ
RVDYCIQLPAPIEAATNREELLTYEAKRKEAEENMRAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLIVQIKKFTFGVDWVPKKLDLAIDVPDFLDLSR
LRATGLQSGEEELPDLLPPIVLPEDTRDNSMSSTDSPEIDEAAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLPLPSMLDPGPSTSESPVGVTPLGNLPPEESI
AILTSMGFPRSHSINALKATNNNLERALDWIFTHPEEEESDALSDMADTEPNGITFSNAN
SHSDSTLSPDQDVSGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYRRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctggtcccttacatgcccaccatcagagtccctaaa
atcggagacagggttttcaagagcgagtgtgccttttccttcgactctcccgagtctgag
ggaggcctgtatgtgtgcatgaacacattcctgggctttggacgggaacacgtggagaga
cattatcgcaaaacaggacagagtgtttacatgcacctcaaacgacatgtcaaagagaaa
gccacaggagctgcaggaggagccatacccagaagaagaaatggaaaagtgttcctagat
ttagagctaaaccgtgattttaacggagaagactatgaatatgaagatgaggccaagctg
gtcattttcccagaccactttgagatcccgttaccaaatatcgaggagttgccggctctg
gtgaccatagcatgtgatgcagtacttaatgcaccgtcagcttacaagaaacaggagcct
gagtcctgggaggaggagatccaggtctccagacacgccagaagcctcagacagctggat
aatggagtccggattccacccagtggctggaagtgccagaaatgcgagatgagggaaaac
ctgtggctgaacctgacagacggatcagttctctgtgggaagtggttcttcgatgggagc
ggaggaaacggccacgctttggagcactacagagagaccaaccaccccctggctgtgaaa
ctggacaccatcaccccagacggagcagatgtctattcatttgaggaggaggaagccgtg
ttggacccccacatatcagaacacctgtcacactttggtatcgacatgctacagatgcag
aagagaacagaaaacgggcaccacacggataacaattcccggccgcgggtcagcgagtgg
gaggtgatccaggagtcgggtatgaagctgaagatggtttatggttctggttacacaggc
atcaagaacctgggcaacagctgctacctgggaaccgtattacaagtcctcttcagcatc
ccagacttccagagaatgtatgttggtaatcttcaaaggatatttgattattcacccctt
gaccccacccaggactttgccacacagatggctaaactgggacacggactgctctcaggc
cagaactccaaaccacccatgaaatctgagctcatagaacaggtgatgaaagaagaacac
aaggtgttaaacgggcacctgcaaaggggcatctctcctcgaatgctgaaggccctggtt
agcaggggacacccagagttttcctccaacaggcaacaagatgcccacgagttcctgctg
cacctcatcaaccaggtggagaggaacagtgccggctcagaaaaccccagcgatgttttt
cgtttcctggtggaggagcgagtccagtgttgtcagactcgccgggttcgttacacccag
agggttgattactgcatccagctgccagctcccatcgaggcagccaccaatagagaggag
ctgctgacttacgaagccaagcggaaagaagcagaggagaacatgagggctcctccagaa
cctgtgcgagcacgcattcctttcacggcgtgtctgcaggccttcacggagccggaaaac
gtccccgacttctggagctcagcgctgcaggccaagtcagctggagtcaaaacctctcga
tttgcctcgttcccagagtatctgattgtgcagatcaagaagttcacctttggtgttgac
tgggttccgaagaagctggacttggccatcgacgttccagacttcctggatctaagtcgg
ctccgagccacagggctgcagtcgggagaggaggagttgcctgaccttttgcctcccatc
gtgttgcctgaggacaccagagataactccatgagctcaaccgactctccggagatcgat
gaggcggcggttatgcagctggcggagatgggttttccactggaggcctgcaggaaggct
gtgtactacacaggaaacatgggcccagagatggccttcaactggatcatagctcacatg
gaggagcccgattttgctgagccactccctctgccttccatgttggatcctggtccctcc
accagtgagagccctgtaggggtcactccgctgggaaacttgccccctgaggagagcatc
gccatcctcacatctatgggtttccctcgttctcacagcatcaacgcactcaaagccacg
aacaataatcttgaacgggcgctcgactggatctttacccacccagaggaggaggagagt
gacgccctctcagacatggccgacacagagcccaatggcatcaccttctctaacgctaac
tcgcacagtgactccacgctgtctccagaccaggacgtatcaggccctcgagtcaaagac
ggacctggacgatacgaactgtttgccttcatcagccacatgggagcctccacgatgtcc
ggacattatgtttgtcacatcaaaaaggagggaaggtgggtgatctataatgaccacaaa
gtctgtttgtcagaaaggcctccaaaggatttgggctacatctacttttaccgtcgactt
tcaagcagttaa
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