Nothobranchius furzeri (turquoise killifish): 107395603
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Entry
107395603 CDS
T05163
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107395603 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107395603 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107395603 (scarb1)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Scavenger receptors
107395603 (scarb1)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107395603 (scarb1)
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Gene cluster
GFIT
Motif
Pfam:
CD36
DUF4534
PorA
Neurensin
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
107395603
NCBI-ProteinID:
XP_015830501
UniProt:
A0A9D3BQY4
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Position
sgr02:complement(36393473..36431271)
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AA seq
501 aa
AA seq
DB search
MAINTSKVAIVFLVAGILTLIFGVVTLFTGPAVLRHQIEKNTMIDPKNELSYTMWKDLPV
PFFMSVYFFNILNPKEVLKGEKPMVEERGPYVYRKYCQKENITFHPNGTVSYREYRRYSF
EPSMSVGNESDVVTIPNMLVLGAAVMLEDLPSGVLFLISSTFKFFKEGPFLTKTVGELMW
GYDSDLVEFLSTYLPGMLPSSGKFGLFLDFNNSNTGLFTIHTGKDDIKKVHKVDSWNGLK
EVSYWRTPQCNMINGTAGQMWPPFLTKESTLPFYSPDACRSLELVYQRSGKMKGIPLYRF
VAPKTMFANGTDYTPNEGFCPCRQSGLLNVSSCRNNAPVFISQPHFFNADPVLQDYVLGL
HPTEKDHGLFIDIHPLTGVPLNVSVRLQLNLYMKRVPGITETGKISEVVMPMLWFEESGY
IDGPVLTTFHNNLVVLPAVMQYMQYIFIALGLVTIIVASLVLYKAKSETRGSRAAPSGDG
STAAEERTPLLQHNAERLTHT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggccatcaatacgtccaaagtagcaatagtttttttagtggcaggaattttgacgctg
atttttggagtcgttacattgtttaccggaccggcggttttgagacaccaaatagaaaag
aacacgatgatcgatccaaagaatgagctgtcttacacaatgtggaaggacctccctgtg
cccttcttcatgtcggtctacttctttaatatcctgaacccaaaggaggtcctgaaagga
gagaagcccatggtggaggagcgaggtccttatgtgtacagaaagtactgccagaaagaa
aacatcaccttccaccccaacggcaccgtgtcctacagagaatatagaagatactcgttt
gagccgtccatgtctgttggtaacgagtcagatgtagtcactattcccaacatgttggtg
ctgggtgcagcagtgatgttggaggatctgccttctggtgtgcttttcttgatcagctcc
accttcaaattttttaaagaaggtcccttcctgactaagactgtgggagagctgatgtgg
ggttatgatagtgacctggtggagttcctgagtacgtacctgcccgggatgctgccctca
tcagggaagtttggtctctttcttgatttcaacaactccaacactggtctcttcactatc
cacaccggaaaagatgacataaaaaaggtccacaaagtcgactcctggaacggcctcaaa
gaggtgagctactggaggactcctcagtgcaacatgattaatggaacagctgggcagatg
tggcctccattcttgactaaagagagcaccctacctttctacagccctgatgcatgcagg
tcgttggaactagtttaccagcggtctggaaagatgaaaggcattcctttgtatcgattt
gttgcaccaaagaccatgtttgctaatgggacagattacacccccaacgaaggcttctgc
ccctgcaggcagtccggtctgctcaacgtcagctcctgccgcaataatgccccagtcttc
atctcccagccccacttctttaacgccgatccggtgctacaggactatgtgttgggtctt
catcccactgagaaggaccatggcctctttattgatatccacccactaacgggtgtccct
ctgaacgtgtccgtccgcctgcagctcaacctttacatgaagagagtgccaggaattaca
gaaactgggaaaatttctgaggtggtgatgccaatgctgtggtttgaggagagcgggtat
atagatggaccagtcctcactacgttccacaacaacctagttgttctacctgctgtgatg
cagtacatgcagtatatcttcatagctcttggtctggtaacgattatagttgcatccttg
gtgctgtacaaggcaaagagtgagacacgtggaagcagagcagcaccaagtggagacggg
agcactgcagctgaagaacgaacccccctgctgcaacacaacgcagagcgactcacacac
acataa
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