Nothobranchius furzeri (turquoise killifish): 107396147
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Entry
107396147 CDS
T05163
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03022
Basal transcription factors
nfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107396147
09124 Replication and repair
03420 Nucleotide excision repair
107396147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107396147
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107396147
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107396147
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107396147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
DZR
Motif
Other DBs
NCBI-GeneID:
107396147
NCBI-ProteinID:
XP_015831186
UniProt:
A0A1A8UE38
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLTATVEEILYQSKKRRVIKSHEQVRLGMMRH
LYFVIDCSRSMDDQDLKPNRLTSTLKLMETFVDEYFDQNPISQVGIIITKNKRAEKLTEL
SGNPKKHIDALKKAVDTPCVGEPSLYNALSLALNNLKHMPGHTSREILIILSSLTTCDPA
NIYELITTLKSLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTVASLSDQDAKPSFSMSHLDSSSGAGLSLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQAFLESPTEKLLKNRFCQACQRELEDKTMFSC
PSCHHVFCLDCDLFIHDSLHCCPCCIQSRGAP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagccagaacgagctaagcgctgggaaggcggctatgagagaacatgggag
gtcctcaaggaggatgagtctggatcccttactgctacagtggaagaaatcctgtatcag
tccaaaaagagaagggtgataaagagccatgaacaagtgaggcttgggatgatgcgccac
ctctattttgtgattgactgttcacgcagtatggatgaccaggacctgaaaccaaaccgc
ctcacttctactctaaagctgatggagacatttgttgatgaatattttgaccaaaatccc
atcagtcaggtgggcatcataataaccaagaacaaacgagctgagaagctgactgagctg
tcaggaaatcctaaaaagcacattgatgcactgaagaaggctgtggacactccgtgtgtc
ggagagccgtccctgtacaacgctcttagcctggccttaaataacctcaagcacatgcct
ggacacaccagcagagagatcctcataatcctcagcagcctgaccacatgtgacccagcc
aacatctatgagctaattacgaccctgaagtctctgaaggtgcgagtgtcagtaatcggc
ttgtcggctgaggtccgggtgtgtacagtactgaccagagagacgggcggctcgtaccac
gttatcctggatgagagccacttcaaggaactactgatgctacacgtgaagcctcctcct
gccagctcctcatcggaatgctctttaatacgtatggggttcccgcagcacactgttgct
tctctctccgaccaggatgccaaaccttccttcagcatgtctcacctggacagcagcagc
ggggcaggtctatctctgggaggatacttctgcccacagtgtcatgccaagtacaccgag
cttcctgtagagtgcaaagtctgtgggttgactctggtgtctgccccccatctggccaga
tcctttcatcacctcttccccctccaggcttttctagagagtcccactgagaagctgctg
aagaacaggttctgtcaggcatgtcagagggaactggaggataaaactatgttttcctgt
ccctcctgtcatcatgtgttttgtctggactgtgatctcttcatccacgattcgctgcac
tgctgcccctgctgtattcaaagtcggggggctccatga
DBGET
integrated database retrieval system
