Candidatus Nitrososphaera gargensis: Ngar_c01490
Help
Entry
Ngar_c01490 CDS
T02305
Name
(GenBank) wyosine base formation domain protein
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
nga
Candidatus Nitrososphaera gargensis
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nga03016
]
Ngar_c01490
Enzymes [BR:
nga01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
Ngar_c01490
Transfer RNA biogenesis [BR:
nga03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
Ngar_c01490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
AFU57099
UniProt:
K0ILI4
LinkDB
All DBs
Position
complement(113915..114952)
Genome browser
AA seq
345 aa
AA seq
DB search
MSCSDEHVSHSTDNNLIQITPQLKARLQKAKYGVYNHSAVELCHWTKKSFANEGTCYKHK
FYGISTHQCMEMTPTAMNCENRCIYCWRPTEFYDTLEMPEELVDEPDVIVQQLMVERKKL
INGYYGNAKNDKKKLDESLLPAHYAISLSGEPTMYPKLPQLIKYLKSLKATKSIFLVTNG
QEPDMLKRLAAEDALPTQIYLSTNASNKKMFHQVNRPLHKDAWERWWESLRFLATVNTRT
VLRMTLIRGYNDSDSFVGEFAEMMAQGDPHFIELKSYMHIGMSNQRLEQDHMLEMHEVRD
FAGRLCEKMPSFKVMDESEISRIVVLQNQVRYTDRWIREYLTPTH
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagctgctccgacgagcacgtttcgcattcgactgacaacaaccttatccagataacc
ccccaactcaaggctagactgcagaaggcaaaatacggcgtctacaaccactctgcggtg
gagctgtgccactggacgaaaaagtcgtttgcaaacgagggcacctgctacaagcacaaa
ttctacggcatctcgactcaccagtgcatggagatgacgccgactgcgatgaactgcgag
aacaggtgcatctactgctggcgcccgacagaattttatgacacgcttgaaatgcccgaa
gagctagtagacgagccggacgtgatagtccaacagctgatggtcgagcggaaaaagctg
ataaacggctactacggcaacgccaagaacgacaagaaaaagctcgacgagtcattgctc
ccggcccattatgcaatttcgctttcaggcgagcctaccatgtatcccaagctcccacag
ctgataaaatacttgaagtcgctcaaggccaccaagtcgatattccttgtgacaaacggg
caggagccggacatgctaaagaggctggcggccgaagatgccctgccgacgcagatctat
ctgtcgaccaatgcgtccaacaaaaagatgttccaccaagtcaataggccgctccacaag
gatgcgtgggagcggtggtgggaaagcctgcgcttccttgccactgtcaacacgaggacg
gtgctccgcatgaccctgataagaggatacaacgacagcgacagttttgtgggtgagttt
gcagaaatgatggctcagggcgacccacactttatcgagctaaagtcttacatgcacatt
ggcatgtcaaaccagcggctggagcaggatcacatgctggagatgcacgaggtgagggac
tttgcaggtaggttgtgcgaaaagatgccctcgttcaaggtgatggatgagagcgagatt
tcaaggatagtggtgctgcagaaccaagtgcgctacactgataggtggatcagggaatac
ctaacgccgactcattag
DBGET
integrated database retrieval system
