Candidatus Nitrososphaera gargensis: Ngar_c19950
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Entry
Ngar_c19950 CDS
T02305
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
nga
Candidatus Nitrososphaera gargensis
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nga02000
]
Ngar_c19950
Transporters [BR:
nga02000
]
Other transporters
Pores ion channels [TC:
1
]
Ngar_c19950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flg_new_2
Y_Y_Y
NPCBM_assoc
Big_1
A_amylase_dom_C
Motif
Other DBs
NCBI-ProteinID:
AFU58927
UniProt:
K0IKH1
LinkDB
All DBs
Position
complement(1561583..1566631)
Genome browser
AA seq
1682 aa
AA seq
DB search
MLVAVAAIGTTSFIFMAQDNYNTAVKKTTELVGNKGKEQITAVQLEEAKLQIANDGPATS
RIIGLVSADDSTGNLSLKPLNLALPSAQKLDYTIPDSTTGGGLGSGKMGLLTSLGNIFWV
DSEPLQNKPLPDFAIAVAPDSLIVEQGKTGTASITVSPLNDFSDAVFLSASGLPHGTSYL
IKPSSGNLPYTSTLTVQVGSATPTGVYTITITGDDKNGGVHSATLTLQVNAASNQDFTLS
VSSKTVTLQRGSSAATNSVTVSPVNGYDKTVTLETSGFPAGVTYSYNPLGAKPLFTSTLT
MGSAANTPAGTYVITVKGSDDTGKVHSDTFTLQITAQPDFDLSVNPSSLNLQSGGSGSSL
VSVTSLNGYPGQVSLSLSGLPSGATATFSKPSGNPSFTSVLDINAGTANPGTYNLIVTGT
GSIDGKTKSAQLTLAIQETSFDFSLVLDSSNVDVQQGGSGSNTVTISPINGYNKIVSLSA
SGIPSGVSASFSPQSGVPAFTSTMSISASTSAAPGSYPVTVQAQGEDGKTHSTTFTLKVQ
AKYQLTISVQTAGPSVAPTTFISDTFGTGLDGWSYWGDSGYSLTRDTGTGSPAPSAKISG
DAFATVHGMQKVVDLSSWSKAGTLTLSFNYRAASDYAGSTVTNAFVRIYNADTDQILYEE
TLVAGGTQDTGWKSYSKDITCSVLSSSSGSNINNKIRIVLFLGDGWSANWNQKNWYDNIK
LESSASAATCGGTTSPAPGTYSYLEDESVQVTALPNAGWKLSYWTLDGVSIGSQNPASVT
MNKDHALAAVFAQGQSGSDFVVSANPSSLSIAKGSSGSSTVTVNSINGYSSGVSLSLSGL
PVGASYSFLPWSSNAPFTSTLTINAGTANAGTYTLSVTGTGVVDGKIRTTTITLTIAPQF
DFSLSLNPSSGTVQQGGTSQTTVTTTLLSGTSSTVSLSASGGPLGMTFTFGPASGNPTFA
STLTISIPSNAATGIYQITVAGSGGGVSRTATYQLTISSQTTQQPFNYAMSISPSSLSIA
KGSSAQTTVSVDLLAGSSAQAVVLSSTGQPSGVAVSFNPSTGNPTFKSTMSISVSSAANA
GTYTLTITGTAGALAKSTTLTLTIVNTADFTLSATPGTLTVQQGSTGSTTIKIDALNGYS
NIVSLSATGLPSGVTYAFIPSSGKPTFSSTLTLSVSQSAATGTFTVTINGAGADGKTRTT
TLTLTIPKQTTYQLTVGVKDQFNAPVKGITVTIDSSSYTTDTSGQVTVQVSQGTHTIAVP
SSYLQSSGTRYLFEKWSDGGGVTANPRTVTVNSAVTFTAMEKKQHYLTMQVSPSSSAGTV
SPSSDWYDSGKQVTISASASSGYKFDTWSGSGSGSYSGTGNPVTITINAPITETASFQKV
YTVSVKTLATYGSLSTSPLSGLKVKIGTATVQTDSNGVASFALPAGTYDISLVDTSVTKS
ITSVDVRGFVFKWWDNLSTSNPRTINVNGPSTLIAYYPITWQQYTLNPNTYTAEVADPSK
TDSLGNPVLRSVSLPYAKSASNWLLGWEWSMDVRTDNKGAHYGAHDYAAWGYTKAFTTKW
NSKLTPATHSYAIDKLAISYSGYLNVKGITSDSDQGLYFRYRDTYNNKGDTSPSVDWTNT
KSYNGVVGAARVFTPKQVIVGDLLVSTYQWTRGSNFDLRFGNGYGWTTNNMVATLYFTST
NP
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgttgcagtggcagctataggcaccacatctttcatattcatggcccaggacaac
tacaacaccgctgtaaagaagaccacagaattagttggcaacaagggaaaggagcagata
actgcagtacagctggaagaagcaaaattacagatagcaaacgatggtcctgcaacatcc
agaataattgggctggtgtcggcagatgattcaacagggaacctcagtctgaaacctctc
aatctggctttaccctctgcacagaaactggattacacgatacctgacagtactacagga
ggaggccttggcagcggcaagatgggtctccttacatctttgggaaatatcttctgggta
gattctgaaccactgcagaacaaacctcttccagattttgcaatagccgttgcaccggat
tcgctgatagtagaacaaggcaagacaggtaccgcgtcgataactgtgagtcccttaaat
gacttctcagacgccgtgtttctgtctgcatctggtcttcctcacggtacaagttacctg
atcaagccgtcaagtggaaatctcccgtacacaagcactttgacagtgcaggtaggctcg
gccacgcctacaggagtttacaccatcacaattacaggtgatgacaagaatggcggggtg
cattctgccaccctgactctgcaggtcaatgccgcatccaaccaagatttcacactgtca
gtgtcatcaaagactgtaactttgcaacggggttcttctgctgcaacaaattcggttact
gtgtcgccggtaaacggctatgacaagacagtaacgctggaaacatcaggttttcctgca
ggggttacctacagctacaaccctctcggtgcaaaaccgctgttcacaagtacactgact
atgggttcagcagcaaacacgccggctggaacctacgtaatcacggtgaaaggaagcgac
gacacaggcaaggtccattcagatacttttacactgcaaataaccgctcagccagacttt
gatttatcagtcaacccgtcatcattgaatctgcagagcggaggttcaggctcctcgtta
gtgtctgtaacatctctgaacggataccccgggcaggtcagcctgtcgttatcaggactg
ccaagcggtgctactgcaacttttagcaagccttctggaaatccatcatttacaagcgtc
cttgacatcaacgcaggcacggcaaacccgggaacatacaacctcatagtgacaggtact
ggaagtatcgacggcaagacaaaatccgcccagctgacgcttgccatccaagagacatcg
tttgacttttcgctggtgctggattcgagtaacgtagatgtccagcaaggcggaagcggt
tctaacactgttacaatctctcctatcaacggctacaacaagatcgtgagcctgtcagca
tctggaattccatccggcgtatctgcctctttcagtccacagagtggtgtccctgcgttc
acaagcacaatgtccatatctgcatcaacgtctgcggcgccaggctcgtaccctgtaaca
gtgcaggcgcagggagaggacgggaaaacccattcaacaacctttacgctgaaagtgcag
gcaaaataccagctgacaatatcagtccagacagccggaccgtctgtcgcgccaaccact
ttcatctcagacacttttggcacaggtcttgatggatggtcatactggggagacagcggc
tattcgctgacccgagacaccggaactggcagtccggccccctcggcaaagatcagtgga
gacgcgtttgccacagtacacgggatgcagaaggtggttgacctttcttcgtggtcaaag
gcagggaccctgacgctatctttcaattacagggctgcatcagattatgctggcagcacg
gtaaccaacgccttcgtccgcatctacaacgccgacacagaccagatactttacgaagaa
acgctcgtagccgggggaacacaggacaccggctggaaatcctacagcaaagacattacc
tgcagcgtgctatcctcatcgtcagggagcaatatcaacaacaagatcaggattgtcctg
tttctgggagacgggtggagcgcaaactggaaccagaagaactggtatgacaatataaag
ctggaaagttcggcgtcagctgcaacctgtggaggcactacgagcccagctcccggcacg
tactcctacctcgaagatgaaagcgtgcaggtaactgccctgcccaacgcaggatggaaa
ttatcgtactggactcttgacggagtaagcatcgggtcccagaaccctgcctcagtcaca
atgaacaaggatcatgcgctggctgcggtatttgcacagggtcaatcaggcagcgatttt
gtggtctctgcaaacccctcctctttaagcattgcaaaaggttcttcaggttcatcgact
gtcaccgtaaactcgataaacggctattcctcgggggtgagcctgagcctgtcaggtctt
cctgtaggggcatcctactccttcctcccatggtcgtcaaatgctccatttaccagtaca
ctgacgataaatgccggcacagcgaacgccgggacatacacgctttctgtcacaggaaca
ggtgtggttgacggcaagatcagaaccaccactataacgcttacgatagcgcctcagttt
gacttctcgctgtcgctgaatccgtcttccgggacggtgcagcagggaggaacctctcag
actacggtgacaacaaccttgctgagtggtacatcatctacagtgagcctctctgcaagt
ggaggaccgcttggaatgacctttactttcggtcctgcttcaggaaatccaacatttgcc
agtaccctgacaatcagcattccaagcaacgctgctactggcatataccaaataactgtt
gcaggaagtggcggaggcgtctcaaggacagcaacatatcagctgacgataagctcgcag
acaacgcaacagccattcaactatgccatgtccatcagtccctcaagcttgtcgattgcc
aaaggttcgtctgcgcagactacagtctctgtagacctactcgcgggatcctctgcgcag
gccgtcgtgctgtcgtcgacaggacagccttccggcgttgctgtctctttcaatccatcg
actggaaatcccacattcaaaagtaccatgagcataagcgtgtcttccgcagctaatgcc
ggcacctataccctgacaataaccggaactgcaggtgcccttgcaaaatccacaacgtta
accctgacaatagtcaatacagcagattttacgctatctgcgactcctggcactctcaca
gtacagcaaggttccactggttcaaccacaatcaagatagatgcactgaatggatatagc
aacatagtatcgctgtcggccacaggtctgccttccggcgttacctatgcattcatcccg
tcaagcggcaagccgactttttcaagtacgctaacactctccgtgtcccagtcagccgct
actggaacattcacagtaacgatcaatggtgcaggtgccgatggcaaaacaaggactacg
actctgacgcttacaatacccaagcagacaacttatcaacttacagtaggtgtcaaggat
cagttcaacgcgccggtgaagggaatcactgttacgatagactcctcctcatacacgacc
gatacaagtggtcaggtaacagtacaggtctcacaaggaacccacaccatagcagttccc
tcttcttatctccagtcgtcaggcacaagatatttgtttgaaaaatggagcgatggcgga
ggagtaacagcaaatccaaggactgtgacggtcaactctgcagtgacttttactgccatg
gagaagaagcagcattacctgacgatgcaggtatcgccttcttcatcagctggtaccgta
tcgccttccagtgactggtacgactctggtaaacaggtgacgatttcagcatcggcatcg
tcaggctacaagttcgatacatggtcaggttctggttcaggctcgtattcgggaacaggc
aaccctgtcacgataacgattaacgcaccaataacagaaacagcaagcttccagaaggta
tacaccgtcagcgtgaaaactctggcaacctatggaagtctttcaacgtcaccgttatcc
ggcctgaaggtaaagataggaaccgccacggtccagacagattccaatggcgtggcatcc
tttgcgcttcctgctggcacctatgacataagccttgtcgatacatccgtgacaaagtcg
ataaccagcgttgatgttagaggctttgtgttcaagtggtgggacaacctctcaacgtca
aatcctaggacgatcaatgtaaacggaccttcaacactgatagcctactatccaatcacg
tggcagcagtacactttgaatccaaatacatacactgcagaagtggctgacccctcgaag
accgactctcttggaaaccctgtcctgaggtcagtatccctgccatatgcaaagtctgcc
agcaattggcttcttgggtgggagtggagtatggatgtgaggacagacaacaagggagca
cactatggcgcccatgattatgccgcatgggggtataccaaggcctttacaacaaagtgg
aactcaaagctgacacctgcaacccactcgtatgcgatagacaaactggcgataagctat
tccggttacttgaatgtgaaaggcataacctcggattcagaccaggggctttacttcaga
tacagagacacctacaacaacaagggagacacaagcccgtctgttgactggacaaataca
aaatcgtacaatggagtggttggagcggccagggtatttactccaaagcaggtgatagtg
ggagacttgcttgtatcgacctatcagtggacaagaggctccaactttgacttgaggttt
ggcaatgggtatgggtggaccacaaacaacatggtcgccacgctttactttacatcgaca
aatccataa
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