Nannochloropsis gaditana: NGA_0675110
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Entry
NGA_0675110 CDS
T02917
Symbol
UTP22
Name
(RefSeq) U3 small nucleolar RNA-associated protein 22
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NGA_0675110 (UTP22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngd03009
]
NGA_0675110 (UTP22)
Ribosome biogenesis [BR:
ngd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
NGA_0675110 (UTP22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D3
Nrap_D4
Nrap_D5
Nrap_D2
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
17362271
NCBI-ProteinID:
XP_005855503
UniProt:
K8Z536
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
AALRELEESKDAGTLKLGEEEDFENENSSENMSESDDHEEDTVEGEEEEEEVDEEEEEEE
EEEEEEEEVQNLEEDEEVEEEEAEEEAEEEEEEGEEEEKEEEEEEEVEDEEDEEEDETEH
LETKGGNSRPTKRGRYAPPTEEEERYLRQPEAFFCRNLLRLQVQEVLADVHLSGWSEQRG
SPTAVRKALTKFLFTLRETLLGMKSGTMPAEASDPAFPFTPHVQWPEASSAPLPFLPPRQ
VEVVGSFMLGALSKPAPSVDVAVEVPAPTFGPRWPWLNYRYHNRRNAYLAHIKQELEGVE
AIRWVERDEGWRRPLAPDLLHVFVDRKLVLFTMPSLVLPLSCSTSSPLFLPASLCVLQID
RGGGLQGGPSPASPCPHADSPYWRSQVRMEGGGEGEGGQGGWKIGSNQAYRLGISNRVRL
WPSIALVDDVKGGVNSKKKGAGKKGESEDATKGGGIMERPKLNPHRCNVRRQSWKDGPEP
STPHYSQGILQEGSFKQHLAVLHSWLGRECTGVKQAVVLLKVWLAQRGSLSALDSFDGFS
LLCLAAFLLQERRLNPRMEVLPALMVMLQFLAETDLTETGTKPLLLKGASSPLDPSLFVG
AFVACLLIEETGGNAFTYLSRSACAELQEEANRALKLLRTDVRSASTVLFLTPFPFLRTF
DYYLRLPLRSKSEQATDAVSVATAQEEERVCCDLPVASYLSRKAAQILSLALGNRARRVR
ALPAACCVEQNLGRKGERGWVWVGISIDPMQALRLVDRGPPAEEETKAREFRAFWGQKAE
LRRFKDGAIVEAVVWGGGGDRHKIVEEIMRYTLGYHLRHRFPPSVATSLRILGNELVMLL
ELSKERSANGASASSSLPSPSLTPEAMTKAALTALDSLTTKLKEGVSSCLPLAIEAVAPL
SPALRHTSLFPPFPHPLVHGASRLLKRLEGQQVSRTVAPLPIQVQLQKSNKWPDDLEALR
RAQTAFLLQIARSLERDPEVKASLAGPNALDMMLDGYVFRASLSVFQESSLLGLEGERVE
KEEVGRWTERAPTHHRLIQACHAANPLYGRVVRLCSIWLSNHLLPPIPSDSALLSSGTAS
SSPCLPLEALELLVAALFSPPGRPPGSLLAGLLAFLSLLSTHNWHSTPLLVDPHHTLLPS
DHEAAEKAFEKHQGKAGVREGGGSMMYLLAPYDKERGWRPSWTSSSCPEPVILARMKALA
AISLQSLLTWMEEGGKEGGWRAAVVPSSPFQAASSPLLQPPQFDVLIRFKPAWVGPLFSG
PYREGWRAWEEVQKGCKALRCGHLYKNLAGAQAQKRVVGMDPVSEYQKKLVKRYGGLALF
FMAGAEGGHREGLAVRFRPRLFLSSSFSVLQSRGKIPIKVKPDEEKRENIDGEGVPFMLP
NVGEVLSDFKRLGEEIVEEVLVL
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
gccgccctgcgagagctcgaggagtcaaaggatgcaggaaccttaaaattaggggaagag
gaggactttgaaaacgagaatagcagtgaaaatatgtcagagagcgacgaccacgaggag
gacacggtggaaggagaagaggaggaggaggaggtagacgaggaggaggaggaggaagaa
gaggaggaggaagaggaggaggaggtacaaaatttagaagaggacgaagaggtggaggag
gaggaagcagaggaggaagcagaggaggaggaggaagagggggaagaggaggagaaggag
gaggaggaagaggaagaggttgaagatgaagaagacgaagaagaggacgaaacggaacac
ttagagactaaagggggaaacagtcgacctaccaaacgagggcggtatgcccctcccacc
gaagaggaagagaggtaccttcgtcagcccgaagcttttttctgtcgaaatctcctacgc
cttcaagtacaagaagttttggcagacgtgcacctatcgggatggagcgagcaaagaggg
agccctaccgcagtcaggaaggccttaacgaaatttttattcacgttgcgagagacactg
ttggggatgaaaagtgggaccatgcctgcggaggcctccgaccccgctttccctttcacc
ccacacgtgcaatggcccgaggcctcgtcggccccccttcccttcctccccccccgtcaa
gtggaggtggtaggttccttcatgctgggcgctttgagcaaaccggcgccctccgtggac
gtggctgtggaggttccagcccccaccttcggtcctcgctggccgtggttgaattaccgg
tatcacaacagacggaacgcctacttggcccatatcaagcaggagttggagggagttgag
gccatcaggtgggtagagagggatgagggttggcgccgacctctcgccccggacctcctg
cacgtttttgtggaccgaaagctggttcttttcaccatgccttcccttgtgctacctttg
agttgctccacttcttcgcctctcttcctccctgcctccttatgcgtgttgcagatcgat
agaggtggaggccttcaagggggaccatcgccggcctctccttgtcctcacgccgacagc
ccatactggaggagtcaagtgaggatggagggaggaggggaaggggaaggagggcaggga
ggatggaagataggtagcaatcaggcttatcgtcttggtatttccaacagggtgcgactt
tggccttcgattgccctcgtcgacgatgtgaagggtggggtcaacagcaagaagaagggg
gcaggaaagaaaggagagtctgaggacgcaacgaaaggagggggcatcatggagcgacca
aagctaaacccgcaccgatgcaatgttcgacgacagtcctggaaggacggtcccgagccc
tcgactccacactattcccaaggcatcctccaggagggctcgttcaaacagcatttggcc
gtgttgcattcgtggctagggcgggaatgtacaggagttaaacaggcagttgtcctcttg
aaggtctggctcgctcagcggggctcgctctctgcgctcgactccttcgacggcttctcc
ctcctctgtctggctgctttccttcttcaagagaggcggctcaatcccaggatggaagtt
cttcccgccctgatggtgatgctccagtttcttgccgaaaccgacttgaccgaaacgggg
acaaaacctttactgctgaagggagcctcttctcctctagacccctcacttttcgtgggt
gcttttgtggcgtgtctgctgatcgaagaaacgggagggaatgcctttacatacctctcc
cgctccgcctgtgctgagcttcaggaggaggcgaatcgggctctcaagttattgcggacc
gatgtccgctctgcctccaccgtcctgttcctcacgcccttcccctttttgcgcaccttt
gactactatctgcgccttcccctccgttcgaaaagcgagcaggccaccgacgcggtcagc
gtagcgacagcacaggaggaagaacgcgtctgctgcgatcttcccgtcgcctcctacttg
tcccgaaaggccgcgcagatcctcagcctcgccctggggaaccgtgcgcgccgcgtgcgt
gctttgcccgctgcttgctgtgttgagcagaacttgggaagaaagggggagcggggatgg
gtatgggtgggcatctcgatcgaccctatgcaggcgttgcgacttgtggatcggggacca
ccagctgaggaggagacaaaggcgagagagtttcgcgcattctggggccaaaaagcagag
cttcgacgcttcaaagacggggccattgtagaggccgtagtgtggggaggaggtggagac
aggcacaagatagtggaagagattatgcggtataccttggggtaccacctgcggcatcgg
tttcctccctctgttgccacctcgctgagaatcttgggaaatgaattggttatgttgctg
gagctttccaaggagcgatcggcaaatggagcgtccgcatcttcgtccttgccctcgccc
tccttgacgcctgaggcaatgacaaaggcggctttgacggcattggattccctgacgacg
aagctcaaagaaggcgtatcgtcctgccttcctcttgccatcgaggcggtcgcccccctc
tctcccgccctccggcacacctccctcttccccccttttccccatcccctcgtccatgga
gccagtcgactcttgaagcgtctagaggggcagcaggtgtctcgtacagtcgcccctctt
ccgatccaggtgcaacttcagaagtcgaacaaatggcccgacgacttagaagcccttcga
cgggcccagacagctttcttgctgcagattgctcggagcctcgagcgcgaccctgaggtg
aaagcctccctggctggccccaacgcactggatatgatgctagacggctatgtgttccgg
gcttctctctccgtttttcaagaaagctccctccttggtctggagggagagcgagtggag
aaggaggaggtggggcgctggacagaacgcgctcccacccaccatcgactcatccaagct
tgtcacgcagccaatcctctgtacggccgcgttgttcgcttatgctccatatggctttcc
aatcatctcctcccacctataccctccgactccgcccttctctcatccggaaccgcttcc
agctcgccgtgtctccccctggaagccctcgaactactcgttgccgcgctcttctccccg
cccggccgacccccagggtccctcctcgctggcctcctcgctttcctgtccctcctttcc
acgcataattggcactccactcccttgcttgttgacccgcaccacacccttcttccttcc
gaccacgaggctgcagagaaagcctttgaaaaacatcaaggcaaagcgggagtccgggag
ggaggggggtctatgatgtatctactggcgccgtacgacaaagagaggggatggcgacct
tcctggacatcctcttcttgcccagagcccgtaatcctagcccgaatgaaggctctcgct
gccatttcgcttcaatcactgttgacatggatggaggaaggtggaaaggagggaggatgg
agagctgccgtggttccttcttcccccttccaggcggcctcgtcgccactcctgcagccg
cctcaattcgacgtattgatccgtttcaagccagcatgggtaggtccactcttctctggc
ccctatcgtgagggatggagggcgtgggaagaagtccaaaaaggctgcaaggctctgcgt
tgtggacacctgtacaaaaatctggcaggtgcacaggcgcagaaacgggtggtggggatg
gatccagtgagcgagtaccagaagaaactggtgaagaggtatggaggcttggctttattt
tttatggcgggggctgaaggaggccatagggaaggcttagcggtaagatttcgtccgcgg
ctgttcctttcctcgtccttttcggtgttgcagagtagagggaaaatcccgatcaaagtt
aagccagatgaagaaaagcgagaaaacatcgacggtgaaggagtaccattcatgctccca
aatgtgggagaggttttgagcgatttcaagcggctgggtgaggaaatcgtggaggaagtg
ctcgtgctttga
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