KEGG   Nannochloropsis gaditana: NGA_0723920
Entry
NGA_0723920       CDS       T02917                                 
Symbol
SF3B2
Name
(RefSeq) splicing factor 3B subunit 2
  KO
K12829  splicing factor 3B subunit 2
Organism
ngd  Nannochloropsis gaditana
Pathway
ngd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NGA_0723920 (SF3B2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngd03041]
    NGA_0723920 (SF3B2)
Spliceosome [BR:ngd03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    NGA_0723920 (SF3B2)
 Complex B
    NGA_0723920 (SF3B2)
 Complex C
   U2 SnRNP specific factors
    NGA_0723920 (SF3B2)
SSDB
Motif
Pfam: DUF382 PSP
Other DBs
NCBI-GeneID: 17361289
NCBI-ProteinID: XP_005854519
UniProt: K8Z7X5
LinkDB
Position
Unknown
AA seq 417 aa
MAHESGGGHTNGSVPTASGAPPPAPAPDVEIQYVSADLESELAGDDPALEEFREIFKKFS
TAEELCGTSVDDEKGVDEGGEGAGEKVSGGEGRGGEEDEEEEKTGSRLSRKQRKKLNRLS
VAELKQLVARPDVVEAHDVTSQDPQLLVQMKAYRNSVPVPRHWCHKRKYLTGKRGIEKAP
FELPDFVKATGIQKQREAMEEKLRLQTARQKMRERVNPKMGRMDIDYAVLEDAFLRYQTK
PPLTPHGELYYEGKEFEARTRNHTPGVLSEELVNALGIPPLYPPPWLMNMQRYGPPPAYP
ALRIPGLNAPLPEGASFGMHPGGWGKPPVDERHWGGVEVEEEEVEEEEEEEEEEEEGEER
RKDESGLETPVTEATGLSSVVSGLETPGEAMGMELRKQAGLEAPSEEPKELYKTRNM
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggcgcatgagtccgggggggggcataccaacggcagcgttcccactgcctccggtgct
cctcccccggcgccagcgcccgacgtcgaaatccaatatgtgtcggccgacctggagagc
gagttggcgggtgatgacccggcgctggaagaattcagggagatcttcaagaagttttcc
acggcggaggagctctgtggcaccagcgtggacgatgaaaaaggggttgacgagggagga
gagggtgcgggggagaaagtttcaggcggtgagggccgggggggggaggaggacgaggag
gaggagaaaactgggtcgcgtctatctagaaaacaacggaagaagctgaaccgactgtcg
gtggcggagctcaagcagctggtagcccgacccgacgtggtggaggcgcacgacgtgacc
tcccaggacccgcagctcctcgtgcagatgaaggcctaccgcaactcggtgccggtgccc
agacattggtgccacaagcggaagtacctgacggggaagcgcggcatcgagaaggcgccc
ttcgagctccccgacttcgtcaaggctaccgggatccagaagcagcgggaggcgatggag
gagaagctgcgcctgcagacggcccgccagaaaatgcgcgaacgtgtgaacccgaagatg
gggcggatggacatcgactacgccgtgcttgaggacgcctttctccgctaccagaccaag
ccccccctaacgccgcacggcgagctctactacgaaggcaaggagttcgaggcgcgcacc
cggaaccacaccccaggcgtgctctcggaggagctggtcaacgcacttggcatccccccc
ctctacccgcctccttggctcatgaacatgcagcggtacggcccccctcccgcctatcct
gcgctgcggatcccgggcttgaacgctcctttgcccgaaggggcgagcttcggaatgcac
ccgggaggttgggggaagccgcccgtggatgagaggcattgggggggcgtggaagtggag
gaggaggaggtagaagaggaagaagaggaagaagaggaagaagaggagggggaggagaga
aggaaggatgaaagtgggctggagacccccgtgacagaggcgacggggctatcgtcggtg
gtgtcgggcctggagaccccgggggaggcgatgggtatggagctgcggaagcaggcgggg
ctggaggcgccgagcgaggaacccaaggagctgtacaagacaagaaatatgtga

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