Nannochloropsis gaditana: NGA_2021500
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Entry
NGA_2021500 CDS
T02917
Name
(RefSeq) putative atp-dependent rna helicase ddx31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
ngd
Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngd01009
]
NGA_2021500
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngd03009
]
NGA_2021500
Enzymes [BR:
ngd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NGA_2021500
Protein phosphatases and associated proteins [BR:
ngd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
NGA_2021500
Ribosome biogenesis [BR:
ngd03009
]
Eukaryotic type
Pre-60S particles
Helicases
NGA_2021500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DUF4217
Motif
Other DBs
NCBI-GeneID:
17362671
NCBI-ProteinID:
XP_005855896
UniProt:
K8YPH1
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
GGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRL
PALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKSGKSSHTLSSEDAA
EQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYD
PPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATP
ARFKGRFRAPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRA
YATHPADLKPIFAVRALHLGHVAKSFALKEPPTALKVGKEVMKISSQRQSVSEHDQNGKS
KHGGDDLRDTDSETVRKMATKNTQKAFQSPRKRSTGSKRRSRTAFSSVSEFSAG
NT seq
1246 nt
NT seq
+upstream
nt +downstream
nt
gggagggggccaagacgggaggccgataggtgggaaagatgatgctgtggaagggaggaa
gggtgaaaatttaccaggagacgccacgcctaacgccactagcagtgagatgagcgatca
tttcacgacacccgttcagctgatacagcagtacatggttgtcacttgcaagcttcgcct
gcctgccctcatatccttcttgcgtgtgcatgccaaatcccataaaactgtcattttctg
ctcgacctgtgactctgtcgacttccactacgcccttttcgagaccaggctagagggaaa
cgaaagaggggcggataaaagcggcaaatcctcacatacgctgtcgtcggaggacgcggc
ggaacagccattgctgggctcggatatgcccgtctacaggttgcacggcaatattcccca
agctgcgcgcttgctcgcattcaaaaccttccgacaggcaccccgcggagtcctgttctg
tactgacgtggcggctcgaggtttggacttacctgcggtcgattggatcgtgcagtacga
tcctcccacagagacagcggagtacgtgcaccgggtgggccggacggcgcggcgaggtcg
tcaaggacattcgattctcttcctcttaccttctgagcagggttacttaaacgtacttaa
aaatcgcggaatcactctcacgcccttgtcattgcagcagacgctgtttgaggccacgcc
cgcgcgttttaagggacgctttcgggcgcctgaggaggtcttctgcctggatatccagca
gcaattggagagagctgtcgccacggcgaaggaggagagaggtatgaatgagaggaaagg
aaatgcttcctcgcctttgctcgcgctcggacgcaaggcgttcggctcttttgttcgggc
ctacgccactcacccggctgacttgaagccaatctttgcggttcgtgctctacatcttgg
ccatgttgctaaaagttttgcactaaaggagcctcctaccgcattgaaagtgggcaagga
agtgatgaaaatttccagccaaaggcaaagcgtaagtgagcatgaccaaaatgggaagag
taagcatggtggtgacgacttgcgagacactgacagcgagacagtcagaaagatggcgac
caaaaatacgcaaaaagcttttcagtcacctcgtaagcgatcaacaggtagcaagcgcag
gagtcgcacagccttcagctctgttagtgagtttagtgcgggataa
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