Nannospalax galili (Upper Galilee mountains blind mole rat): 103727886
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Entry
103727886 CDS
T03372
Symbol
Vps11
Name
(RefSeq) VPS11, CORVET/HOPS core subunit
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04140
Autophagy - animal
ngi04148
Efferocytosis
ngi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103727886 (Vps11)
04148 Efferocytosis
103727886 (Vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103727886 (Vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103727886 (Vps11)
Membrane trafficking [BR:
ngi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103727886 (Vps11)
Hops complex
103727886 (Vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
TPR_11
DLP_helical
zf-RING_11
zf-HC5HC2H
zf-C3HC4_3
zf-RING-like
zf-ANAPC11
DUF5847
Motif
Other DBs
NCBI-GeneID:
103727886
NCBI-ProteinID:
XP_008824185
LinkDB
All DBs
Position
Un
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFEKELVKEPLGNDGSAPGAAPASAPSASKFLCLPSGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLIKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTN
RDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSPEGRGDRETPGCRANSEEFIPIFANN
PRELKAFLEHMSEVQLDSPQGIYDTLLELRLQNWAHEKDPQAKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVITVCERHGEQDPSLW
EQALSYFARKEEDCKEYVAAVLQHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDSDCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTARLTPSLEAGLQRDMLMHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctatttgcagtggcggcgcttcgttttcttcgagaaggagctggtgaaggag
ccgctgggcaatgatgggtccgctcccggggccgcgcctgcctctgcaccctccgcttcc
aagttcctttgcctcccttctggcatcactgtctgcgattcaggccgagggagcctggtc
tttggagatatggaaggccagatctggttcttgccacgatccttacagctcacaggtttc
caggcttacaaactacgggtgacacacctgtatcaactgaagcagcataatattctggca
tctgttggtgaggatgaagagggtattaaccctctgataaagatctggaacctggagaag
agagatggtggcaatccactctgcacacgaatcttccctgctatcccaggaacagaacca
actgttgtgtcttgtttgactgtccatgaaaatctcaactttatggccatcggtttcaca
gatggcagtgttacactgaacaagggagatatcacccgggaccggcacagcaagactcag
attttacacaagggaaactatcctgttactggactggcctttcgccaagcaggaaagacc
actcacttgtttgttgtgacaactgagaatgttcagtcctatatagtttctggaaaggac
taccctcgtgtggagttggacacccatggttgtggcttgcgctgctcagccctgagcgat
ccttctcaggacctgcagttcattgttgccggcgatgagtgtgtctacctttatcagcct
gatgaacgtgggccctgctttgcctttgagggccataagctcatcgcccactggtttaga
ggctaccttgtcattgtctctcgtgaccggaaggtttctcccaagtcagagttcacaaac
agggactcacagagctccgacaagcagattctcaacatctatgacctgtgcaacaagttc
atagcctacagcgctgtttttgaggatgtagtggatgtgctggctgagtggggctccctg
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa
ctggagatgctgtttaagaagaatctgtttgagatggcaattaacctggccaagagtcag
catctggacagtgatgggctggctcagattttcatgcagtacggagaccatctctacagc
aagggtaaccatgatggagctgtccagcagtatatccgaaccattggaaagttggagcca
tcctatgtgatccgcaagttcctggatgcccagcgcatccacaacctcactgcctaccta
cagaccctgcaccgacaatcactggcaaatgctgatcatactaccctgctgctgaactgc
tataccaagctcaaggacagctcaaagctagaggagttcatcaagacaaagagcgagagc
gaagtccactttgatgtggagacagctatcaaggtcctccggcaggccggctactactcc
catgccctctatctggctgagaaccatgcacatcatgagtggtacttgaagatccagttg
gaggacattaagaattatcaggaagcccttcggtacatcggcaagctgccttttgagcag
gcagagagtaacatgaaacgctatggcaagatcctcatgcaccacataccagagcagacg
acccagttgctaaagggtctttgtactgactatcggcctagtccggaaggccgaggtgat
cgggagactccaggctgccgagccaactctgaggagttcatccccatctttgcaaacaac
ccacgagagctgaaagctttcctggagcacatgagtgaagtacagctggactcaccccag
ggtatctatgacacacttttggagcttcggttacagaactgggcccatgagaaggatcca
caggccaaggagaaactccacgctgaagccatctctctgctaaagagtggccgcttctgt
gatgtatttgacaaggctttagtcctgtgccagatgcatgacttccaggatggggtcctt
tacctctatgaacagggaaagctgttccagcagatcatgcattaccacatgcagcatgag
cagtaccggcaggtgatcacggtgtgtgagcgccacggggagcaggatccctctctgtgg
gaacaggccctcagctactttgcccgtaaggaggaggactgcaaggagtatgtggcagcc
gtgcttcagcatatcgagaacaagaacctcatgccacccctgctagtggtgcagacccta
gctcacaattccacagccaccctctctgtcatccgagactacctggtccagaaactgcag
aagcagagccagcagattgcacaggacgagctgcgggtgaggcggtaccgggaggagacc
acacgcatccgccaagaaatccaggaactcaaggctagcccgaagattttccagaaaacc
aagtgcagcatttgtaacagtgccttggagttgccctcagtgcacttcctgtgtggccac
tccttccaccagcactgctttgagagttactcagaaagtgattctgactgcccaacctgc
ctccctgaaaatcggaaggtgatggatatgattcgggcccaagaacagaaacgagatctc
catgatcagttccagcaccagctcaagtgctccaatgacagcttctctgtgattgctgac
tactttggccgaggagttttcaacaagttgactttgctgactgaccctcccacagccaga
ctgacgcccagcctggaagctgggctgcagcgggacatgctaatgcactccaggaggggc
acttaa
DBGET
integrated database retrieval system
