Nannospalax galili (Upper Galilee mountains blind mole rat): 103728975
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Entry
103728975 CDS
T03372
Symbol
Thoc1
Name
(RefSeq) THO complex 1
KO
K12878
THO complex subunit 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013
Nucleocytoplasmic transport
ngi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103728975 (Thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
103728975 (Thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103728975 (Thoc1)
03041 Spliceosome [BR:
ngi03041
]
103728975 (Thoc1)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103728975 (Thoc1)
Spliceosome [BR:
ngi03041
]
Complex C
Other components
EJC/TREX
103728975 (Thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103728975 (Thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
103728975
NCBI-ProteinID:
XP_008825181
UniProt:
A0A8C6QC92
LinkDB
All DBs
Position
Un
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSACENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHIEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERAADTKPTRVIRKRAAPE
DFLGKGPNKKILMGNDELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVYANKLGEHWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPDNLISALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgcttttcagtttgcctgaggcgcggacgcggtttacgaaatct
accagagaggccttgaacaacaaaaatatcaagccattgttgaacaccttcagccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagagattataaatcattcagcatgtgagaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtactgcatcaacaccttttgtattgttgggcgatgtt
ttggattgccttcctttggatcaatgtgacacaatattcacttttgtcgaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctggaaaaaattatttactacgtatgtgc
aatgatctcctcagaagattatctaaatcccagaatacagtcttctgtgggcgaattcag
ctctttttggccaggctttttcctctatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggtcag
aagcacattgaggatagagaagaagggatggatgtagaagaaggtgaaatgggagatgat
gaagccccaacaacttgttctattccgattgattacaacctgtatagaaaattctggtca
cttcaggattactttaggaacccagtacaatgctatgagaagatttcatggaaaactttt
ctcaagtattctgaagaagttttagctgtttttaagagttacaaattagatgatactcaa
gcctccaggaaaaaaatggaagagttgaaaacaggaggagaacatgtgtattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaacttccgtcgacat
atcctgttgcagtatctcattttattccagtacctcaaggggcaagtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggatagaagatactacaaaatcagtc
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaattggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagagcagcagataccaagcccacaagagtgatacggaagagagcagccccagaa
gacttcctaggcaaaggacctaacaagaaaattctgatgggaaatgatgagttaacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatcagaaacaagggaatacatg
ccaactttggaggaattctttgaagaagccattgaacaagcagaccctgaaaatatggtt
gaaaatgagtataaagctgtgaacaattcaaattatggttggagggctctgagactattg
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagaa
tatctcgaaaatatggtaataaagctagccaaggaactaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagataaacctgtaactggggaacaaatagaggtatatgccaacaag
ttaggtgagcactggaagattctggctccctacttggaaatgaaagactctgaaatccgg
cagattgagtgtgacagtgaagacatgaagatgagagctaagcagctccttgttgcctgg
caagatcaagaaggagtccacgcaacacctgataatctgattagtgcactcaacaagtct
ggattaagtgaccttgcagaaagtctaactaacgacaatgagacaaatagttag
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integrated database retrieval system
