Nannospalax galili (Upper Galilee mountains blind mole rat): 103738588
Help
Entry
103738588 CDS
T03372
Symbol
Usp13
Name
(RefSeq) ubiquitin specific peptidase 13 (isopeptidase T-3)
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngi01002
]
103738588 (Usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103738588 (Usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngi04147
]
103738588 (Usp13)
Enzymes [BR:
ngi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103738588 (Usp13)
Peptidases and inhibitors [BR:
ngi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103738588 (Usp13)
Ubiquitin system [BR:
ngi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103738588 (Usp13)
Exosome [BR:
ngi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103738588 (Usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
HYPK_UBA
Motif
Other DBs
NCBI-GeneID:
103738588
NCBI-ProteinID:
XP_008836878
UniProt:
A0A8C6QMZ3
LinkDB
All DBs
Position
Un
AA seq
858 aa
AA seq
DB search
MQRRGALFSVPGGGRKMAAGDLGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGL
YVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKIFLDLDT
DDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDTW
ENELPVSRYANNLAQLDSGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGGN
GHALEHYRDTGYPLAVKLGTITPDGADVYSFQEEEPVLDPQLAKHLAHFGIDMLHMQGTE
NRLQDNDMKPRISEWEVIQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQR
AYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPMKSELIEQVMKEEYKPQQN
GISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEDRIQ
CCQSRKVRYTERVGYVMQLPVAMEAAVNKDELIAYELTRREAEANRRPLPELVRAKIPFS
ACLQAFSEPDNVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFDVS
IDMPDLLNISHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQLA
EMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTVPMYGGAGASVFGATGLD
NQPPEEIVAIITSMGFQRNQAMQALRATNNNLERALDWIFSHPEFEEDSDSVIEMENNAN
ANIISEAKPEGPRIKDGPGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHKVCAS
ERPPKDLGYIYFYRRVPS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcagcgtgccgggcggcggcaggaagatggctgcaggg
gacctgggcgagctgctggtgccccacatgcccacgatccgcgtgcccaggtcgggggac
cgtgtgtacaagaacgagtgcgccttctcctacgactccccgaactctgaaggcggactc
tatgtatgcatgaatacatttttggcctttggaagggaacatgttgaaagacattttcga
aaaactggacagagcgtgtacatgcatctgaaaagacacgtgagagagaaggtgagaggt
gcatctggtggagctttgccgaaaaggaggaattccaagatttttttagatctagatact
gatgacgatctaaatagcgacgattacgagtacgaagatgaagccaaacttgttatattc
ccagaccactatgaaatagcccttccaaatattgaggagctaccagccctggtcacgatt
gcttgtgatgcggttctcagctccaagtccccgtacagaaagcaggacccagacacctgg
gaaaacgagctgccggtgtcgagatacgccaacaacctggcccagctggacagtggcgtg
aggatcccccccagtggctggaagtgcgccaggtgtgatctccgggagaacctgtggctg
aatctgactgatggctctgtcctgtgtgggaagtggttttttgacagctcagggggcaat
gggcatgcgttggagcattacagagacacaggctacccgctggccgtgaagctgggcacc
atcacgcctgacggggcagatgtctattcttttcaagaagaggaacctgttttggaccct
cagttggccaaacacttagcacattttggaattgatatgcttcacatgcaggggacagag
aacaggctccaggacaacgacatgaagccacggatcagtgagtgggaagtgatccaggag
tcggggacgaagctgaagcccatgtatggccccgggtacaccggcctgaagaacctgggt
aacagctgctacctcagctctgtcatgcaggccatcttcagcatcccagagttccagaga
gcgtatgtaggaaaccttccaagaatatttgactactcaccactagatccaacgcaagac
ttcaacacacagatgactaagttgggacacggcctcctctcaggccagtactcaaagcca
cccatgaaatccgagctcatcgagcaggtgatgaaggaggaatacaagcctcagcaaaat
gggatctctccacgcatgttcaaagcctttgtcagcaagagtcacccagaattctcctcc
aacagacagcaagatgctcaggagtttttcttgcacttggtgaatctggtggagaggaac
cgcattggctcggaaaaccccagtgatgttttccggtttttggtggaagaccgtattcag
tgctgtcagagccgcaaggtccgctacaccgagagggtgggctatgtgatgcagctgcct
gtggccatggaggcggcggtcaacaaagacgagctgattgcctatgagctaaccagaagg
gaggcagaggcaaacagaagaccccttcctgagttggtgcgagccaagatacccttcagt
gcctgcctccaggccttttctgaaccagacaatgtagatgatttctggagcagtgctctg
caagcaaagtcggcgggtgtgaaaacatctcgctttgcctcattccctgaatacttggta
gtgcagataaagaagttcacttttggtcttgactgggttcccaaaaaatttgatgtttct
atcgatatgccagatctgctaaacatcagccatctccgagccaggggcttacagcctgga
gaagaggaacttccggacatcagcccccccatagtcattcccgatgactcaaaagatcgc
ctgatgaaccagctaatagacccctcagacattgatgagtcctccgtgatgcagctggcg
gagatgggctttcccctggaggcctgccggaaggctgtgtacttcactggaaatatgggc
gccgaggtggccttcaactggatcattgtacacatggaggagccagattttgccgaaccg
ctgaccgtgcctatgtatggaggggcaggagcctctgtgtttggtgctactggactggac
aaccaacctcctgaggagatcgtggccatcatcacctccatgggattccagagaaatcag
gccatgcaggctctgcgagcaacgaataacaacctggaaagggcactggactggatcttt
agccaccctgagtttgaagaggacagtgactccgtgattgaaatggagaacaatgccaac
gccaacatcatatctgaggccaagcctgaagggcccaggatcaaggatggacccggaatg
tatgagttgtttgcgttcatcagtcacatgggaacgtctacaatgagtggccattatgtt
tgccatatcaaaaaggaaggaaggtgggtaatctacaacgaccacaaagtctgcgcctca
gaaaggccccccaaagacttgggttacatatacttctaccgccgggtaccaagctaa
DBGET
integrated database retrieval system
