Nannospalax galili (Upper Galilee mountains blind mole rat): 103751686
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Entry
103751686 CDS
T03372
Symbol
Lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103751686 (Lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103751686 (Lig4)
Enzymes [BR:
ngi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103751686 (Lig4)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103751686 (Lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
103751686
NCBI-ProteinID:
XP_008853418
UniProt:
A0A8C6QZD8
LinkDB
All DBs
Position
Un
AA seq
911 aa
AA seq
DB search
MAASQIPQTVASHVPFADLCSTLERIQKSKDRAEKIKHFKEFLDSWRKFHDALHKNKKNV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGMHT
DAGDFAVIAYFVLKPRCLQKGSLTIQQVNELLDSVASNNSAKRKDLVKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTIFSIFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAVADIERVEKDMKHQSFYIETKLDGERMQMHKDGEVYQYFSRNGYNYTD
QFGASPQEGSLTPFIHNTFRKDVRVCILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSEL
QTCYCVFDVLMVNNKKLGRETLRKRHEILSSTFTPIQGRIEIVQKTQAHTKNEVVDALNE
AIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGLRGGMM
SHFLCAVAEKPPPGERPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKSPPSSILC
GTEKPEVYIEPCNSVIVQVKAAEVVPSEMYKTGSTLRFPRIEKIRDDKEWHECMTLGDLE
QLRGRASGKLASKHLLVGADDEPREKRRKAAPRTKKIIGIIDHLRAPDLSNISKVSSVFE
DVEFCVMSGMAGHPKPDLENRIAELGGYIVQNPGPDTYCVIAGSENIRVRNIISRDKHDV
VKPEWLLECFRTKTCVPWQPRFMIHMCPSTKQHFAHEYDCYGDSYFVDTDLDQLKEVFSG
MKSPSEHTAEDLASVIADLEYRYSWDHAPLNMFRRCTIYLDLYAVINDSSSKIEATRLAV
TALELRFHGANVVSCLSEGVSHVIVGEDQRHVTDFKAFRRTLKKKFKILQEHWVTDSIDK
CELQEENQYLL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaattccacaaactgttgcatcccatgtcccctttgcagatttatgt
tcaactttagaacgaatacagaaaagcaaagaccgtgcagaaaaaatcaagcactttaag
gaatttttagattcttggaggaaatttcatgacgcccttcataagaacaaaaagaatgtt
acggattctttttacccagcaatgaggcttattcttcctcagttagagagagagagaatg
gcttatggaatcaaagaaactatgctcgctaagctgtatattgaattgctcaatttacca
agagaagggaaagatgccctgaagctcctgaattacagaacaccgactggaatgcacaca
gatgccggagactttgccgttattgcttactttgtgctaaagccaagatgcttacagaaa
ggaagcttgaccatccagcaggtgaatgaacttttagactcagttgccagcaataactct
gccaaaagaaaagatctagtaaagaagagccttcttcaactaataactcagagttcagcc
cttgagcagaagtggctgatacgcatgattataaaggacttaaagcttggtgtcagtcag
caaactatattttccatttttcataatgatgctgctgagttgcacaatgttaccacagat
ctagaaaaggtctgtaggcagctgcatgatccctctgtaggactcagtgacatctctatc
actttattttctgcctttaaaccaatgttagctgcagttgcagatattgagcgtgtggag
aaggacatgaaacaccagagtttctacattgaaaccaagctggacggtgagcggatgcag
atgcacaaagatggggaagtgtatcagtacttctcccgaaatggatataactacactgat
cagtttggagcttctccacaggaaggctcccttaccccattcattcataacacattcaga
aaagatgtgcgggtctgcatccttgatggggagatgatggcctataacccaaacacacag
actttcatgcaaaaggggattaagtttgacattaagagaatggtggaagattctgagctg
cagacttgttactgtgtttttgatgtgttgatggtgaataataagaagctaggacgggag
acccttagaaagaggcatgagatcctgagttccacctttacacccatacaagggaggata
gaaatagtacagaaaacacaagcacatacaaagaatgaagtagtcgatgccttaaatgaa
gcaatagataagcgagaagagggaatcatggttaaacatcctctgtccatttacaagccg
gacaaaaggggtgaaggctggttaaaaattaaaccagagtatgtcaacggactaatggat
gaattggatatcttaatcgtagggggttattggggtaaaggcttacggggtggcatgatg
tcacactttttgtgtgcggtagcggagaagccccctcctggggagaggccatctgtattt
cacactctgtgccgtgttgggtcaggatacaccatgaaagaactgtatgatctgggtttg
aaattggccaaacactggaagccttttcataaaaaatctccaccaagtagcattttatgt
ggaacagaaaagccagaagtgtacatagagccttgcaactctgtcatcgtgcaggtgaag
gcagcagaggttgtccccagtgaaatgtacaagactggctccacactgcgattcccacgc
atcgagaagatcagagatgacaaggagtggcatgagtgcatgaccctgggagacctggaa
cagctgagggggagagcatccgggaagcttgcgtccaagcacctgctcgtaggtgctgat
gatgaacctcgagagaaaaggcggaaagctgcccccagaacaaagaaaataattggaatt
attgaccacttaagagcgcctgacctttccaacataagcaaagtttccagtgtatttgaa
gatgtagagttttgtgttatgagtggaatggctggtcatccaaagcctgacctggagaat
cggattgcagaattgggtgggtacatagtgcaaaatccaggcccagacacatactgtgta
attgcagggtctgagaacatcagagtgagaaacattatttctagagataagcatgatgtc
gtgaagcccgaatggctcttagagtgttttagaactaaaacctgtgtgccatggcagcct
cgctttatgattcacatgtgcccatcaaccaaacaacattttgcccatgaatatgattgt
tacggtgatagctattttgttgatacagatttggaccaactgaaagaagtattttcagga
atgaagagccctagtgaacataccgctgaagacttggcctccgtgattgctgatttagaa
taccgttattcatgggatcacgctcctctcaacatgttccgacgctgcaccatttatttg
gacttgtatgctgttattaatgactcaagttccaaaattgaggccacaagattagctgtg
acagccctggagctccggtttcacggagcaaatgtagtttcctgcttatctgagggagtg
tctcatgttattgttggggaagatcagagacatgttacagattttaaagcttttagaagg
actcttaagaaaaagtttaaaatcctacaagaacattgggtaactgattcaatagacaag
tgtgaattacaggaagaaaaccaatatttgctttaa
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