Nannospalax galili (Upper Galilee mountains blind mole rat): 108491187
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Entry
108491187 CDS
T03372
Symbol
Gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03022
Basal transcription factors
ngi03420
Nucleotide excision repair
ngi05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108491187 (Gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
108491187 (Gtf2h4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
108491187 (Gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
108491187 (Gtf2h4)
03400 DNA repair and recombination proteins [BR:
ngi03400
]
108491187 (Gtf2h4)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108491187 (Gtf2h4)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108491187 (Gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
108491187
NCBI-ProteinID:
XP_017655418
UniProt:
A0A8C6W2T7
LinkDB
All DBs
Position
Un
AA seq
463 aa
AA seq
DB search
MECTSSRAGLNRAHLQCRNLQEFLGGLSPGVLDRLYAHPATCLAVFRELPSLAKNWVMRV
LFLEQPLPQAAVALWVKKEFSTAQEESTGLLSTLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSTEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENAAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcacttcttcgagggctggactgaaccgagcacacctacagtgcaggaatcta
caggagttcttagggggcctgagtcctggggtgctggaccgattgtatgctcaccctgcc
acttgtctggctgtcttcagggagctcccatctttggctaagaactgggtgatgcgggtg
ctctttctggagcagcccctgccacaggctgctgtggccctgtgggtgaagaaggaattc
agcacggctcaggaggaaagcacagggctgctgagcaccctccgtatctggcatacacag
ctgctccctggcggactccagggcctcatcctcaaccccatcttccgccagaacctccga
attgcccttctgggtgggggcaaggcctggtctgatgacacaagtcagctgggaccagac
aagcacgctcgggacgtcccctcacttgacaagtatgccgaggagcgctgggaggtggtc
ttgcacttcatggtgggctcccccagtgcagccgtcagccaggacctggctcagctcctc
agccaagctggactcatgaagagcactgagcctggagagccgccctgcattacctctgct
ggcttccagttcctgctgctggacacacctgcccagctctggtacttcatgctgcagtac
ctgcagacagcccagagccggggcatggacctagtggagattctctccttcctcttccag
ctcagcttctctactctgggcaaggactactccgtggaggggatgagtgactctttgttg
aacttcctgcagcatttgcgtgagttcgggcttgttttccagaggaagaggaaatctcgg
aggtactaccccactcgcctggccatcaatctctcatctggcgtctctggggctggaggc
actgtgcaccaacccggcttcattgttgtggaaaccaattaccgactgtatgcctatacg
gagtcggagctgcagatcgctctcatcgccctcttctctgagatgctctatcgcttcccc
aacatggtggtggcacaggtgacccgggagagtgtgcagcaggccatcgccagtggcatc
accgcccagcagataatccatttcttaaggacaagggcccacccagtgatgctcaaacag
accccggtgctgccacccaccatcacggaccagattcggctgtgggagctagaaagggac
agacttcggttcaccgagggcgtcctgtacaaccagttcctgtcgcaagtggacttcgag
ctgctgctggcccacgcgcgcgagctgggcgtgctggtgttcgagaacgcggccaagcgg
ctgatggtggtgacgccggccgggcacagcgacgtcaagcgcttctggaagcggcaaaag
cacagctcctga
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