Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH26760
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Entry
RG1141_CH26760 CDS
T03208
Name
(GenBank) Putative ATP-dependent RNA helicase with P-loop hydrolase domain (RhlE gene)
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Pathway
ngl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RG1141_CH26760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngl03019
]
RG1141_CH26760
Enzymes [BR:
ngl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RG1141_CH26760
Messenger RNA biogenesis [BR:
ngl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RG1141_CH26760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Helicase_RecD
UTP25
ERCC3_RAD25_C
AAA_19
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
CDN55013
UniProt:
A0A068T995
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All DBs
Position
2630413..2632149
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AA seq
578 aa
AA seq
DB search
MTNFHELGLSKQTVATLFALGYETPTPIQAQAIPQLLEGRDMIGLAQTGTGKTAAFGLPI
IEMLAKDPKRPDNRTTRTLILAPTRELVNQIAASLKSYVRGTPMKINAVVGGASINKQQL
QLEKGTDILVATPGRLLDLIARRAIGLTAVRYLVLDEADQMLDLGFIHDLRKISKMVPNK
RQTLLFSATMPKAIADLASDFLKDPVQVSVTPPGKAADKVEQFVHFVVGKNDKTDLLKKS
LEENPTGRAMVFLRTKHGAEKLSKHLEHIGFKVASIHGNKSQGQRERALKAFRDNEIRVL
VATDVAARGIDIPGVTHVFNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDEARLLRD
IERLMNIEITTASGERPEGGRQPRGGAGNNNRGGAAKSGRGGNGQARGNGEGRPERRERP
ARKPFFAAEGAEGGDRPQRPARANGDRPHGDRPQRDNRRNDDFRGQRRGENTPRPDVDND
LSTTSDFRPAKKQFGPQDGMKNGEGRPARTEPRKEHRKGGNGAPNPHAAHGAHEPAAQRN
NRGPRVEAARPAAGGNAGPVKFGNDNRSGQQGRTRRPA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaatttccacgagcttggtctgtccaagcagaccgtagccactctttttgcgctc
ggttacgaaacgccgaccccgatccaggcccaggcgatcccccagcttctcgaaggccgc
gacatgatcggccttgcccagaccggcaccggcaagaccgctgcattcggtctcccgatc
atcgaaatgcttgccaaggacccgaagcgtcctgacaaccgcaccacccgtacgctcatc
ctcgctccgacccgcgaactggtcaaccagattgcggccagcctgaagagctacgtgcgc
ggtaccccgatgaagatcaacgccgtcgtcggcggcgcctcgatcaacaagcagcagctg
cagctcgaaaagggtaccgacattctcgtcgcgaccccgggccgcctgctcgacctgatc
gcccgccgtgccatcggcctgaccgcagttcgctacctcgtcctcgacgaagccgaccag
atgctcgatctcggcttcatccacgatctgcgcaagatttccaaaatggtgccgaacaag
cgccaaaccctgctcttctcggccaccatgccgaaggcgatcgccgatcttgcctccgac
ttcctcaaggatccggtccaggtttcggtcacgcctccgggcaaggccgccgacaaggtc
gaacagttcgtccacttcgtggtcggcaagaacgacaagacggaccttctcaagaagtcg
ctcgaagaaaacccgaccggccgcgccatggttttcctgcgcaccaagcacggcgccgag
aagctctccaagcatctcgagcatatcggcttcaaggttgcctcgatccacggcaacaag
agccagggccagcgcgaacgcgccctcaaggccttccgtgacaacgagatccgtgttctg
gtcgccaccgacgttgctgctcgcggcatcgacatccctggcgtcactcacgtcttcaac
tacgacctaccggaagtaccggacgcctacgttcaccgcatcggccgcaccgcgcgtgcc
ggccgcgacggcattgcgatcgccttctgcgcccccgatgaagcccgcctgctacgcgac
atcgagcgcctgatgaacatcgaaatcaccaccgcatccggcgaacgccccgaaggcggc
cgccagccacgcggcggtgccggcaacaacaaccgtggcggcgcggccaaaagcggccgg
ggcggcaacggccaggcacgcggcaacggcgaaggccgtcccgagcgccgcgaacgtccg
gcccgcaagccgttcttcgcagcggaaggcgccgagggcggtgatcgtccccagcgtccg
gcccgcgccaacggcgatcgtccccatggtgaccgcccacagcgcgacaatcgtcgcaac
gacgatttccgcggccagcgtcgcggcgagaacactccgcgcccggacgtcgacaacgac
ctctcgaccacgtcggatttccgcccggccaaaaagcagttcggtccccaggatgggatg
aagaacggcgaaggccgtccggcgcgcaccgagccccgcaaggaacaccgcaagggcggc
aatggggctccgaacccgcatgctgcacacggcgcccatgaacccgctgcccagcgcaac
aaccgcggcccgcgcgtcgaagccgcccggcccgccgctggcggcaacgcaggtccggta
aagttcggcaacgataaccgctccggccagcagggccgcacacgccgcccggcgtaa
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