Nonomuraea gerenzanensis: LCN96_12965
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Entry
LCN96_12965 CDS
T07782
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn00040
Pentose and glucuronate interconversions
ngn01100
Metabolic pathways
ngn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LCN96_12965
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCN96_12965
Enzymes [BR:
ngn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LCN96_12965
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
PSD2
Motif
Other DBs
NCBI-ProteinID:
UBU15878
LinkDB
All DBs
Position
complement(2701387..2703621)
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AA seq
744 aa
AA seq
DB search
MIALTVIATLTPAATAATTRATIVVAADGSGDHTNVQDAVNAVPPGNTRPVTILVRRGTY
KQQVVIPADKPHITLRGDTRDPREVVLTFDASASTPKPDGSGTYGTSGSASYVISAPDFT
ARDLTFENSYDEAANGNSQAVAVRTTGDRQVYDNVRFLGNQDTLYANTGSASTFARQYFH
NCYVEGDVDFIFGRATAVFDRCVIKALSRGSTDDNGYVTAASTEIGNPYGFLIHRSHLVS
DASARTFHLGRPWPAGGSVTARGQVLVRESWLGQQFKDAPWTDMSGLSWREARLSEYRNH
GPGATVNDDRPQLTAEQARAFTPERYLAGADGWNPVRRPAHTRPEPGREVLPRDDGWAAA
TTGTTGGSAARPEDVHVVSTRAQLLAALGDPADNTPRIVYVKGAVDADTDAAGNPLTCDD
YAMDGYSLPAYLAAYDPAVWGRTSLPSGPLEEARKASYAKMAAHVTVTIGSNVTLMGLGG
DAALKSFGLRISNADNVIVRNLTITDTADCFPQWDPTDGAEGNWNASFDNMEVSASTHVW
LDHNTLNDGDNPDSGQPLHFGRPYQVHDGLLDVVRGANYVTLSWNHLSGHDKVSLIGNTD
NPTRYAEEDKLKVTLHHNYFDSLGQRTPRVRFGQVHVYNNYYRGGAGHGYSIGVGFGSKV
YAESNAFDGIAAAKVLTVFNGTAITARDNLVDGVVTDVVAAYDEANGTALGTDAGWTPAL
VPRVHPAKALRYLVPAGAGAGRLR
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccctgacagtgatcgccacgctcacccccgcggccacggccgcgaccacccgc
gccacgatcgtcgtggccgccgacggctcgggcgaccacacgaacgtgcaggacgccgtg
aacgccgtgcccccgggcaacacccggccggtcacgatcctggtgcgcaggggcacctac
aagcagcaggtggtcatccccgccgacaaaccgcacatcacgctgcgcggcgacacccgc
gacccgcgcgaggtggtgctcaccttcgacgcctcggcgtccaccccgaagccggacggc
tccggcacctacggcacctcgggcagcgcctcgtacgtgatcagcgcccccgacttcacc
gcccgcgacctcaccttcgagaactcctacgacgaggcggcgaacggcaacagccaggcc
gtcgcggtcaggacgacgggcgaccggcaggtctacgacaacgtcaggttcctcggcaac
caggacaccctgtacgccaacacgggctccgccagcacgttcgcccggcagtacttccac
aactgctacgtcgagggcgacgtcgacttcatcttcggccgcgccacggccgtgttcgac
cgctgcgtgatcaaggcgctgagccggggcagcacggacgacaacggctacgtcaccgcc
gccagcacggagatcggcaacccgtacggcttcctgatccaccgcagccacctcgtcagc
gacgcgtccgcccgcaccttccacctcggccgcccgtggcccgccggcggctccgtcacg
gcgcgcggccaggtgctggtccgcgagtcctggctgggccagcagttcaaggacgcgccc
tggaccgacatgtcggggctgagctggcgcgaggcccgcctgtccgagtaccgcaaccac
ggcccgggcgcgaccgtgaacgacgaccgcccgcagctcaccgcggagcaggccagggcg
ttcacgccggagcggtacctggcgggcgcggacggctggaacccggtgcgccgcccggcc
cacaccaggcccgagccgggccgcgaggtgctgccgcgcgacgacggctgggcggcggcc
accaccggcacgacgggcggctccgcggcccgcccggaggacgtgcacgtcgtctcgacc
agggcgcagctgctggccgcgctgggcgacccggccgacaacaccccgcggatcgtctac
gtcaagggcgccgtcgacgccgacaccgacgccgcgggcaacccgctgacctgcgacgac
tatgccatggacggctacagcctgcccgcctacctggccgcctacgacccggccgtctgg
ggcaggaccagcctcccgtcggggccgctggaggaggcccgcaaggcctcgtacgccaag
atggccgcgcacgtcacggtcaccatcggctccaacgtcacgctcatgggcctgggcggg
gacgccgcgctgaagagcttcggcctgcggatcagcaacgccgacaacgtcatcgtgcgc
aacctgaccatcaccgacaccgccgactgcttcccgcagtgggacccgaccgacggcgcc
gagggcaactggaacgcctccttcgacaacatggaggtctccgcctccacccacgtgtgg
ctggaccacaacacgctcaacgacggcgacaacccggactcgggccagccgctccacttc
ggccgcccgtaccaggtgcacgacgggctgctcgacgtcgtgcgcggcgcgaactacgtg
acgctctcgtggaaccacctcagcggccacgacaaggtgagcctgatcggcaacactgac
aaccccacgcggtacgccgaggaggacaagctcaaggtcacgctgcaccacaactacttc
gactcgctcggccagcgcacgccccgggtgcggttcgggcaggtgcacgtgtacaacaac
tactacaggggcggcgccgggcacgggtacagcatcggcgtcggcttcggctcgaaggtc
tacgccgagagcaacgccttcgacgggatcgccgcggcgaaggtgctgacggtgttcaac
ggcacggcgatcacggccagggacaacctggtggacggcgtggtgaccgacgtggtggcc
gcgtacgacgaggccaacggcacggcgctgggcacggacgcgggctggacccccgcgctg
gtcccccgcgtgcatccggccaaggcgctgaggtacctggtgccggcgggcgcgggcgcg
gggcgcctgcgctga
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