Nonomuraea gerenzanensis: LCN96_29495
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Entry
LCN96_29495 CDS
T07782
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
Organism
ngn
Nonomuraea gerenzanensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
Beta_helix
CBM_4_9
NosD
DUF1565
Pentaxin
Motif
Other DBs
NCBI-ProteinID:
UBU08528
LinkDB
All DBs
Position
complement(6308751..6314381)
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AA seq
1876 aa
AA seq
DB search
MSIIETAYPVPADAVFVAPGGNDANAGTVDAPLRTAGAAVAKAAAGRMTTIVLRAGEYRE
RLGNVAAPVTLQPYPGERVWFKGSSEIQQSQLTPDGNAWRLDGWNPGSVCRASAPAYDEC
MNPLHFNDDNPVGGDPQMVFVDGEPLRQVATREEVKAGTFYHDGPADRTYLGSDPSGRRV
EITARKSGMHFFAGADGSVVRGLGFAHYGSSQNQTKEPAALIAQAKGMVFEKNTIIHNAA
SGLLINADDVRVSGNAIAENGYQGIGAHRAANLTVEGNRVLRNNTEQLGFSQGYHLAGAG
MNATRVTGATVRDNVFEANQGVGLWCDLSCHDVTIIRNLIRANSRHGLHYKVSGKALIAS
NVLAGNGMTGLSLLGSNHVRVINNTSVGNAQAMAIQEDARPTCPGTEDVCPTDAEKALGI
TWDTADITLTNNVIAGGTSTAPLVNTTDNNTGESGRRVGADGMIPAAQMHHNGYSRTGAD
TPATLVQWSRVTGSSIHYPSLAQFQAATGRDASSRYQESSYLVNADAGDYRLVPGSPAES
AGAELPADVAALLGVPSGQPVRLGALAWPAEPARTELVRNGKLEQPSIVPWWSAGNPSLA
VENGELRAAVADGTAEPGDAVVTQLTGSLISGRTYTLSFDARASADVAVQVAVQDGEAPY
SAALSQGVELETGRQRFSFPFTSTVDTTAAEVVFQLGGKGAITVHLDDVSLVENTWALSK
EPKQTEAEALAAAAATGQLVEVLSERGETREVYATPDGSFTSKEHFQPVRVLKDGAWTPV
DTKLRKLPDGSVVPTATPAEIKLSGGGTGPLVTIERAGRPMSLTWPAALPKPWLDGDSAV
YPGVLGADVDLRVRVEPEGFSHVLVVKTAAAAGDPRLASIKLNLSAPGLSVRTAEDGTQQ
AVDEATGGVVYEAPVPIMWDSTAPAPAAAARAATADDGETPGEDLTDGGVVEASASQPGD
TSKIATVATSVAGGEMTLKPDPDLLTGADTTYPLYIDPMWDTPRASARLMVSSAGWGKYN
FTKNEGMGRCPRDYPPAGRYCNGWYEKRLFYRVPTARFAHKQIISAEFHVQETFATSCRK
RIVDIYLAKSFGAGSTWSSTSDNWVRRLDSRNVAKGWSSGCPAGDVLFNVTGAVQEAARK
GWSNTTFGLRARDGGDQLAWKRFDRNAFVRVHYNSPPAQPKMSQLSSSPGGPCRGPATPA
TFNRLPTLYAKNLTDPDNKGVEGEKLKAQFQVIWTENGVQKVKNLGTVKKMSANGPRKSS
FSVVIPRDLVPQGVVAHWGVRAYDGRAWSPWSWDGNATACYFVYDARALPEPKVTSTGAD
GYPALDPADPAQVPTDGVGRYGTFTIALDTRVSKYAWAMNTDPAEGTAKAKTAATEPIKA
MPTHPGLNTLYVTAWDAANNWSTGTYEFWVADGKGPKAHWKLDEAAGATRLADVQGAHPA
TPQGGAALGAPGALSTAMRLNGTTAYAATSGPVLNTTQNLAVSAWVKMPATLPTTHFVVA
SQAATKNSPFYLKYDPGDKKWKLWRVQTDASTTGAGTAYSREPAKPGGWTHLVGVQDVVT
KKLRLYVNGVEGVPADLTTAAWAAGGAFQIGRGLYNGQFANYTPGVVDDVRVFDRVVTGD
EVRDLYTIKPVVESKWHLNTATGTPPASPDTGQGVAYPLTLNGAARITTDFAEVFVQSPA
GTPSGALRLPGGNNDYAAATGPVIDTRDSFTVSAWVSTPGEPSRSMTVLALAGSHNSAIT
VRYDPGKQRYVLDVPDKDGTGATTAGVEHSMFHQGNFGDWDHLAVTYDATEATVTLWVNG
VKEAASGADNLSFRHRTRPFGPIASLQVGRGLTGGSYPAGRNWAGVIDDVWVLRGVASQQ
LIDMLALPTEISSIPG
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
ttgtccatcatcgagacggcgtatcccgtaccggctgacgccgttttcgtggcgcccggc
gggaacgacgcgaacgccggcacggtggacgcaccgctgcggaccgcgggggcggcggtg
gccaaggccgcggcgggcaggatgaccacgatcgtgctgcgcgcgggtgagtaccgcgag
cggctgggcaacgtcgccgcgccggtgaccctgcagccgtatccgggggagcgggtctgg
ttcaaaggcagctcggagatccagcagagccagctgacccccgacgggaacgcctggcgg
ctggacggctggaacccgggcagcgtgtgccgggccagcgcccccgcctacgacgagtgc
atgaacccgctgcacttcaacgacgacaacccggtgggcggcgacccgcagatggtcttc
gtcgacggcgagccgctgcgccaggtggccaccagggaagaggtcaaggccggcaccttc
taccacgacgggcccgccgacaggacctacctcggcagcgacccgtcggggcgccgggtg
gagatcaccgccaggaagagcggcatgcacttcttcgccggcgcggacggctcggtcgtg
cgcgggctcgggttcgcccactacggcagcagccagaaccagaccaaggagccggccgcg
ctcatcgcgcaggccaagggcatggtgttcgagaagaacacgatcatccacaacgccgcg
tcgggcctgctgatcaacgccgacgacgtacgggtgagcggcaacgcgatcgccgagaac
ggctaccagggcatcggcgcgcaccgggcggcgaacctgacggtcgagggcaaccgggtg
ctgcgcaacaacaccgagcagctcggcttctcccagggctaccacctggcgggcgccggc
atgaacgccacccgggtcaccggcgcgaccgtgcgcgacaacgtcttcgaggccaaccag
ggcgtcggcctgtggtgcgacctgtcgtgccacgacgtgacgatcatccggaacctgatc
cgcgccaactcccgccacggcctgcactacaaggtctccggcaaggcgctgatcgcctcc
aacgtgctggccggcaacggcatgaccgggctgagcctgctgggctccaaccacgtccgg
gtgatcaacaacacctccgtcgggaacgcgcaggcgatggcgatccaggaggacgcgcgg
ccgacgtgccccggcacggaggacgtctgcccgaccgacgccgagaaggcgctgggcatc
acctgggacaccgcggacatcacgctgacgaacaacgtgatcgccggcggcacgagcacc
gcgccgctggtcaacaccaccgacaacaacaccggcgagtcggggcgccgggtgggcgcc
gacggcatgatcccggccgcccagatgcaccacaacgggtactcgcgcaccggcgcagac
acgccggcaacgctcgtgcagtggtcgcgggtgaccggctccagcatccactacccgtcg
ctggcgcagttccaggccgcgacaggccgcgacgcgagctcccgctaccaggagagcagc
tacctggtcaacgccgacgccggtgactaccggctggtgccggggagcccggccgagtcc
gcgggcgccgagctgcccgccgacgtcgccgcgctgctcggcgtgccgtccggccagccg
gtcaggctcggcgcgctggcctggccggccgagccggccaggaccgagctggtccgcaac
ggcaagctggagcagccgtcgatcgtgccgtggtggtcggcgggcaacccgtcgctcgcc
gtggagaacggggagctgcgggccgccgtcgccgacggcaccgcggagccgggcgacgcc
gtggtcacgcagctcaccggcagcctgatcagcgggcgtacctacacgctgtcgttcgac
gcgcgcgcctcggcggacgtggccgtccaggtggcggtgcaggacggcgaggcgccgtac
agcgccgcgctctcgcagggcgtcgagctggagacgggccgccagcgcttctccttcccg
ttcacctccacggtcgacacgaccgcggccgaggtggtcttccagctcggcggcaagggc
gcgatcaccgtccacctcgacgacgtctccctggtggagaacacctgggccctgtccaag
gagccgaagcagaccgaggcggaggcgctggccgccgccgccgcgaccggtcagctggtc
gaggtgctgtcggagcgcggcgagacccgcgaggtgtacgccacccccgacggcagcttc
acctccaaggagcatttccagcccgtacgggtgctgaaggacggcgcctggacgcccgtc
gacaccaagctgcgcaagctgcccgacgggtcggtcgtgccgaccgcgacgccggcggag
atcaagctgtccggcggtggcaccggcccgctggtgacgatcgagcgggcgggccggccg
atgtcgctgacctggcccgcggcgctgcccaaaccgtggctggacggcgactccgccgtc
taccccggcgtcctgggcgcggacgtggacctgcgggtgcgggtggagccggagggcttc
tcccacgtgctggtggtcaagaccgccgcggcggccggggatccgcgcctggcgagcatc
aagctgaacctgtccgcgcccggcctcagcgtgcggacggcggaggacggcacccagcag
gcggtggacgaggccaccggcggcgtggtctacgaggccccggtgcccatcatgtgggac
tccaccgcccccgcccccgccgccgctgcccgggcggccaccgccgacgacggggagacg
cccggcgaggacctgacggacggcggcgtcgtggaggcctcggcgagccagccgggcgac
acctccaagatcgccaccgtggccacgagcgtggccggcggcgagatgaccctcaagccc
gacccggacctgctcaccggcgcggacaccacctatcccctctacatcgacccgatgtgg
gacaccccccgcgcctcggcgcgcctgatggtctccagcgccggatggggcaagtacaac
ttcaccaagaacgagggcatgggccgctgcccccgcgactacccgcccgccggccgctac
tgcaacggctggtacgagaagcggctgttctaccgcgtccccacggccaggttcgcgcac
aagcagatcatctcggccgagttccacgtgcaggagacgttcgcgacctcgtgcaggaag
cgcatcgtggacatctacctggccaagagcttcggcgccggctccacctggagctccacc
tcggacaactgggtgcgcaggctggacagcagaaacgtggccaagggctggagctccggc
tgccccgccggtgacgtgctgttcaacgtgacgggcgccgtccaggaggcggccaggaag
ggctggtccaacaccaccttcgggctgcgcgcccgcgacggcggcgaccagctcgcctgg
aagcgcttcgaccgcaacgccttcgtccgggtgcactacaacagcccgccggcccagccg
aagatgagccagctgtcctccagccccggcggcccctgccgcggcccggccaccccggcc
acgttcaaccggctgccgaccctgtacgccaagaacctcaccgaccccgacaacaagggc
gtggaaggggagaagctcaaggcgcagttccaggtgatctggacggagaacggcgtccag
aaggtcaagaacctcggcaccgtgaagaagatgtcggccaacgggccgcgcaagtcctcc
ttcagcgtggtgatccccagggatctcgtcccgcagggcgtcgtcgcccactggggcgtg
cgcgcctacgacgggcgggcgtggagcccgtggagctgggacggcaacgccacggcctgc
tacttcgtctacgacgccagggccctgcccgagccgaaggtcacctccaccggcgccgac
ggctaccccgcgctcgacccggccgaccccgcgcaggtgccgacggacggcgtgggccgg
tacggcacgttcacgatcgctctcgacacccgggtcagcaagtacgcctgggcgatgaac
accgaccccgccgagggaacggcgaaggccaagaccgccgccaccgagccgatcaaggcg
atgcccacgcacccgggcttgaacacgctgtacgtgacggcgtgggacgcggccaacaac
tggtcgaccgggacctacgagttctgggtggccgacggcaagggcccgaaggcgcactgg
aagctcgacgaggcggccggagcgacccggctcgccgacgtccagggcgcccacccggcc
accccgcagggcggcgccgccctcggcgcacccggcgcgctgagcaccgcgatgcggctg
aacggcaccaccgcctacgccgccaccagcggcccggtgctgaacaccacccagaacctg
gccgtgtcggcgtgggtgaagatgccggccacgctgcccaccacccacttcgtcgtggcc
agccaggccgcgaccaagaactcgcccttctacctgaagtacgacccgggcgacaagaag
tggaagctctggcgggtccagaccgacgcgagcaccaccggagcgggcaccgcgtactcc
agggagccggccaagcccggcgggtggacccacctggtgggcgtgcaggacgtggtgacc
aagaagctgcggctctacgtcaacggcgtggagggcgtgcccgccgacctgaccacggcg
gcctgggcggccggcggcgccttccagatcggccgcggcctgtacaacgggcagttcgcc
aactacacgccgggggtcgtggacgacgtccgggtcttcgaccgggtggtgaccggcgac
gaggtgcgcgatctctacacgatcaagcccgtggtcgagagcaagtggcacctcaacacc
gccaccggcaccccgcccgccagccccgacacggggcagggcgtcgcctacccgctgacg
ctcaacggcgccgccaggatcaccaccgacttcgccgaggtgttcgtgcagtcgccggcc
ggcacgcccagcggcgcgctgagattgccgggcggcaacaacgactacgccgcggcgacc
ggaccggtgatcgacacccgcgacagcttcaccgtctcggcctgggtgtccaccccggga
gagcccagccggtcgatgaccgtgctggccctggcgggatcgcacaacagcgcgatcacc
gtgcggtacgacccgggcaagcagcgctacgtgctggacgtaccggacaaggacggcacc
ggcgcgacgacggccggcgtggagcactccatgttccaccagggcaacttcggcgactgg
gaccacctcgccgtcacctacgacgcgaccgaggcgacggtcacgctgtgggtgaacggg
gtgaaggaggccgcgagcggcgcggacaacctgtccttccgccaccgcacccggcccttc
ggccccatcgcctcgctccaggtcggccgcggcctcaccggcggctcctacccggcgggc
aggaactgggccggcgtcatcgatgacgtctgggtgctgcgcggcgtggcctcgcagcag
ctcatcgacatgctggcgctcccgacggagatctcctcgatccccggctga
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