Nocardia gipuzkoensis: LTT66_07105
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Entry
LTT66_07105 CDS
T07945
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ngp
Nocardia gipuzkoensis
Pathway
ngp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LTT66_07105 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngp03019
]
LTT66_07105 (groL)
03110 Chaperones and folding catalysts [BR:
ngp03110
]
LTT66_07105 (groL)
03029 Mitochondrial biogenesis [BR:
ngp03029
]
LTT66_07105 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngp04147
]
LTT66_07105 (groL)
Enzymes [BR:
ngp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LTT66_07105 (groL)
Messenger RNA biogenesis [BR:
ngp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LTT66_07105 (groL)
Chaperones and folding catalysts [BR:
ngp03110
]
Heat shock proteins
HSP60 / Chaperonin
LTT66_07105 (groL)
Mitochondrial biogenesis [BR:
ngp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LTT66_07105 (groL)
Exosome [BR:
ngp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LTT66_07105 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LTT66_07105 (groL)
Exosomal proteins of breast cancer cells
LTT66_07105 (groL)
Exosomal proteins of colorectal cancer cells
LTT66_07105 (groL)
Exosomal proteins of bladder cancer cells
LTT66_07105 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UGT69931
LinkDB
All DBs
Position
complement(1520895..1522505)
Genome browser
AA seq
536 aa
AA seq
DB search
MAKQIEFDEKARRALERGVDKLADAVKVTLGPRGRHVVLAKSFGGPTVTNDGVTIARDIE
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQALVRAGLKNVAAGANPIVLGSGIA
KAADVVSEALLALATPVSGEQAIAQVATVSSRDEEIGEMVGKALTTVGKDGVVTVEESST
LQTELVVTEGVQFDKGYLSPYFVTDPDSQQAVLEDVFVLLHREKISSLPDFLPLLEKVAE
SGKPVLIIAEDVEGEALSTLVVNAIRKTIKAVAVKAPFFGDRRKAFLDDLAVVTGGTVVN
PDLGITLREAGLDMLGKVRRVVVSKDDTTIIDGAGSAADVEARVAQLRREIESTDSDWDR
EKLEERLAKLAGGVAVIKVGAATETALKERKYRVEDAVSAAKAAVEEGIVPGGGTALVQA
SAKLVELRDSLSGDEAVGVEVVRTALQAPLYWIATNAGLDGAVVVSKVAEGKEGFNAATL
TYGDLLTDGVVDPVKVTRSAVVNAASVARMVLTTESAVVEKPAEEQHDHGHHGHAH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcagatcgagttcgacgagaaggctcgccgggctctggaacgcggcgtcgac
aagctcgccgacgcggtgaaggtcactctcggcccgcgcggacggcatgtcgtgctcgcg
aagtccttcggcggcccgaccgtcaccaacgacggcgtcaccatcgcgcgcgacatcgag
ctcgaagacccgttcgagaacctcggcgcgcagctggtcaagagcgtcgccaccaagacc
aacgatgtcgcgggcgacggtacgaccaccgccaccgtgctggcccaggcgctggtccgc
gccgggctgaagaacgttgccgccggcgcgaatccgatcgtcctcggctccggcatcgcc
aaggccgccgacgtggtctccgaggcgctgctcgcgctggccaccccggtctccggcgag
caggccatcgcgcaggtcgcgacggtgtcctcgcgtgacgaggagatcggcgaaatggtc
ggcaaggcgctgaccaccgtcggcaaggacggcgtcgtcaccgtcgaggagtcctcgacg
ctgcagaccgaactcgtcgtcaccgagggcgtgcagttcgacaagggttacctctcgccc
tacttcgtcaccgatcccgacagccagcaggccgtcctggaggacgtgttcgtcctgctg
caccgcgagaagatcagctcgctgccggacttcctgccgctgctggagaaggtggccgag
agcggcaagccggtcctgatcatcgccgaggacgtcgagggcgaggcgctgtcgaccctg
gtggtcaacgccatccgcaagacgatcaaggccgtggccgtgaaggccccgttcttcggc
gaccgccgcaaggcgttcctcgacgacctggccgtggtcaccggcggcaccgtggtgaac
cccgacctgggcatcaccctgcgtgaagcgggcctcgacatgctcggcaaggtgcgtcgc
gtcgtcgtcagcaaggacgacaccacgatcatcgacggcgccggttccgcggcggacgtg
gaggcgcgcgtggcgcagctgcgccgcgaaatcgagtccaccgattccgactgggatcgc
gagaagctcgaggagcggctggccaagctggccggtggcgtcgcggtgatcaaggtcggc
gcggccacggagaccgcgctcaaggagcgcaagtaccgcgtcgaggacgcggtgagcgcc
gccaaggccgccgtcgaagagggcatcgtgcccggtggtggcaccgcgctggtgcaggcg
agcgccaagctcgtcgaactgcgcgactcgctgtccggtgacgaggccgtcggcgtcgag
gtggtgcgcaccgcgctgcaggcgccgctgtactggatcgccaccaacgcgggcctggac
ggcgcggtggtggtcagcaaggtggccgagggcaaggagggcttcaacgccgccacgctc
acctacggcgacctgctcaccgacggcgtggtcgacccggtcaaggtgacccgttcggcc
gtcgtgaacgcggcgtcggtcgcgcgcatggtgctcaccaccgagagcgccgtggtcgaa
aagcccgccgaggagcagcacgatcacggccaccacggccacgcgcactga
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