Naegleria gruberi: NAEGRDRAFT_50278
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Entry
NAEGRDRAFT_50278 CDS
T01241
Name
(RefSeq) type IIB DNA topoisomerase
Organism
ngr
Naegleria gruberi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
2OG-FeII_Oxy_3
Motif
Other DBs
NCBI-GeneID:
8852226
NCBI-ProteinID:
XP_002675419
JGI:
Naegr1_50278
UniProt:
D2VKE9
LinkDB
All DBs
AA seq
1251 aa
AA seq
DB search
METIQVRERIEEKVLAFVRELVSSPSSDIPNEKGFLLKDLTKYPSTFISKFQVMNLVYQL
CTLNKFSTKRDLYYCNKPILKDQTQLDSILKDLSSSWRVNRHDLHIVPQSKGEVCGPIAW
KEISLIDIENRGQQPTTTIVSASKGCNLPSIPHLQIVEFSIPVEVDKVIIVEKESVFQVL
KSQASSLKDTSLIITSKGYPDVPTRDFIVTLTKQVAKYQRRSLNIFTLTDGDPYGAEIAN
VYMNGSLSFENEKENLTIHSCVDSTEDWHYWVLQTCSRMSWIGVHLNDFDNAPQLISKWK
DCWMPLEELDLKKINSLNNTQLELDDTVKTQINLQKDLNYKVEIEESSETDSDYCEAYGS
DFYDDCVQLHADTIKTSDNLQEFILDAQNKGGSKFTQCGALDSDFGLPGLQLKLDNEQFK
TIGFPLSNGSASELIQFCSKAPYGRGEDTIYDENVRKTWQLDPSRFEITNPTWDDLIDGL
VDNEIRDGLGISKHLRLSANLYKLLVYEEGGHFQFHKDSEKEERMFGTLVVQLPSEYSGG
EIIVRHGEEEEEYDFASVSRYTPHFISFYADCEHMIKNVNSGYRVCLIYNLCFSGNKESK
PTLKGYEELAKRLQQIVSEWNADAKDVDTLYRMYVFQHQYSQKSLDPENLKGSDYNIYDI
LERYAEEYQDLVLDLGIMERKVEGFDDPEVSLEYIFGSQQRKIDVPFRSVVCKSALSSMK
LFHKSINENTGNEGSTKEKQYRNACLMIYPKKCQQRICLKFGFSFCSKILPSFIESNSRE
NSIAFVKQMLAKKNIYLWGDEEKVVIQSIIQLNDVELAKLVIGIDQKSLSSLISHFTIEP
FRETISENLCKKRYMKEFIGSLIEINDVPLIQMTMPKYSVNKYDHLYDSSCFEKLIILAQ
KCTYSMHSTVVENIVEDYYKYASYKESITKLIDLLKDTSIYEKLIVKELAKNSIPNQRGR
GSYENKELDLPLIIKIANQIGVEKLKNLRFSFSKWLTSENCLNMVLSTMSCKPLSELLIE
WMLYDHRDCFLDLKFATSFIRMLHNHSWNDFITRACRVVLSVASEENYSTLVAPLIEVVS
NIMPKSDQLDILLNWSIDLIDDGIRTKKFIIPLPNFSVKSSISCICSDCKILKQFLWSET
ERTCSITGLVKELSHIESMVAPIREIQKQRVQKSIILTKLVISERLVKQATELNNAAKTK
LESLLKKRRTPPEESTDNNSTLQLEVAPSSSIEPPNKKSKTDAPEIICIDD
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaattcaagtgagagaaagaattgaggagaaagttttagcctttgtgagggaa
ttagtttcatcaccatcatctgatattccgaatgaaaaaggcttcttgctgaaagatctg
accaaatatccatcaacatttatttccaagtttcaggtgatgaatttagtgtatcagttg
tgtactttaaacaaattttcaaccaagagagatttgtattattgtaacaagcctattcta
aaagatcagacacaactagattccatattgaaggatttatcatcaagttggcgagttaat
aggcatgatcttcatattgttcctcaatcgaagggagaagtttgtggaccaattgcttgg
aaggaaatctcattgattgatattgaaaatagaggacaacaaccaacaacaactatagtc
agtgcttctaaagggtgtaatcttccttcgattcctcatttacaaattgtagagttctct
atccctgttgaagtagataaggtgatcattgttgaaaaagagtcagtttttcaagtgttg
aaaagtcaagcaagcagtctcaaagatacatcattaataatcacatctaagggatatcct
gatgttccaacaagagattttattgtaacactaacaaagcaagtagcaaaatatcaaagg
agaagtttgaatattttcacactcacagatggtgatccttatggagctgaaattgccaat
gtttacatgaatggttcgttatcatttgaaaatgagaaggagaatctgaccatccatagt
tgtgtagactccaccgaagattggcattattgggtgcttcaaacttgttccagaatgtca
tggattggagttcatttgaatgattttgacaatgctcctcaattgatttcaaagtggaag
gattgttggatgcctctggaagaattggatttgaaaaagataaactctctaaacaacacc
caacttgaattggatgacactgtaaaaactcaaattaatttacaaaaagatttaaattac
aaagtcgaaatagaggaatcatcggaaacagacagtgactattgtgaagcttacggttcc
gatttttatgatgattgtgttcaacttcatgctgataccattaaaacatcagacaattta
caagaatttattttggatgctcaaaacaagggaggaagtaaatttacgcagtgtggtgca
ttggacagcgattttggtttaccaggtttgcaactcaagttggataatgaacaatttaaa
acaattggatttccattgtcgaatgggagtgcttcagagctaattcaattttgcagtaag
gcaccatatggaagaggagaggatacaatttacgatgaaaatgttagaaaaacatggcaa
ttagatccatcaagatttgaaattacaaatccaacttgggatgatttgattgacggttta
gtggataatgaaattagggatggcttgggaattagtaaacatctcagactctcagctaat
ttatacaagctattagtatatgaagagggaggtcactttcaatttcacaaagattcggaa
aaggaagaacgaatgtttggaacactagttgttcaacttccttcggaatatagtggaggt
gaaataatagttagacacggagaggaagaggaagaatatgattttgcatctgtttctaga
tatactcctcactttatttctttttatgcagattgtgagcacatgattaagaatgtaaat
tctggttacagagtttgtttgatatataacctttgtttttcaggtaacaaagaaagtaag
ccaacacttaaaggttatgaagaattagccaaaagacttcaacaaatagtttctgagtgg
aatgctgatgcaaaagatgttgacactctctacagaatgtatgtatttcagcaccaatat
tctcaaaagagtttggatcctgaaaatcttaaaggttctgattacaatatttacgatatt
ctggaaaggtatgctgaggaatatcaagaccttgttttagatttaggaattatggagagg
aaggtggaaggttttgacgatccagaagtatcactcgagtatatttttggatcccaacaa
cgtaaaatagacgttcctttcagaagtgttgtttgcaagtctgctctgtcttccatgaaa
ctattccacaagtccattaacgaaaatactggaaatgaggggtcaacaaaagaaaagcaa
tacagaaatgcatgtctaatgatttatccaaagaagtgccaacaaagaatttgcctcaag
tttggattttcattttgtagcaaaatattaccttcattcatagagtcaaactctagagag
aattctattgcatttgtaaagcagatgctggccaagaaaaacatctacttatggggtgat
gaagaaaaagttgtaattcaatctattattcagctcaatgatgtcgaattggcaaaactg
gttatcggaatagaccaaaaaagtttatcttctcttatttctcattttacaattgaaccg
tttagagaaactattagcgaaaatttatgtaaaaaacgatatatgaaggaatttattggc
tctctaattgaaatcaatgacgtgccgttgatacaaatgacaatgccaaagtattctgtc
aataagtatgaccatttatacgatagcagctgctttgaaaaattaataatacttgcacaa
aaatgtacatattcaatgcattcaacagtagtagaaaatattgtggaagattattataag
tatgccagttataaggaaagtattacaaagttgatagacttattgaaggacacctcaatc
tatgagaaattgattgtaaaagaattggctaaaaactctattccaaatcaaagaggaaga
ggttcttatgaaaacaaagagctggaccttccattgataatcaaaattgcaaatcaaatt
ggggttgaaaaattgaaaaatctacgtttttcattctctaaatggttgacaagtgaaaat
tgtttgaatatggtgttatcaacaatgagttgtaaacctctgagtgaattattgatagaa
tggatgttatatgaccatcgagattgtttccttgatttgaaattcgcaacttccttcatt
cgaatgctccataaccattcatggaatgattttattactagagcatgccgcgttgttctt
agtgttgcatcagaagagaattatagcaccctagtcgctccactcattgaggttgtttcg
aatattatgcctaaatctgaccagttagatatcctactgaactggagcattgatttaatt
gatgatggaattagaacaaagaagttcattattcccctaccaaatttttctgtgaaatct
agtatttcatgtatttgtagtgactgtaagattctaaaacaatttttatggtcagaaaca
gagagaacttgttcaatcactggcctagttaaggaactttcacacattgaatcgatggtt
gctccaattagggaaatacagaaacaaagagttcagaaatcaattattttaacaaaactt
gtgatctctgagagacttgtgaaacaggcaaccgaacttaacaatgcagctaaaactaaa
ctggaatctttattgaaaaagagaagaaccccacctgaagagtcaacagataataattcg
acacttcaactagaagttgctccctcatcttcaattgaaccaccaaacaaaaagtcaaaa
acggatgcaccagagattatttgcattgatgattaa
DBGET
integrated database retrieval system
