Naegleria gruberi: NAEGRDRAFT_69317
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Entry
NAEGRDRAFT_69317 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ngr
Naegleria gruberi
Pathway
ngr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAEGRDRAFT_69317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_69317
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NAEGRDRAFT_69317
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NAEGRDRAFT_69317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
Glyco_trans_1_2
Motif
Other DBs
NCBI-GeneID:
8862904
NCBI-ProteinID:
XP_002675565
JGI:
Naegr1_69317
UniProt:
D2VK97
LinkDB
All DBs
AA seq
676 aa
AA seq
DB search
MAEVDRTVKKVNEGIENFDELEEKVYSAQSSSQRDKFEGELKKEIKKLQRLRETIRGWIS
GNEIKDKELLVEKRQQIETRMERFKKCEQKTKMKAYSKEALSKSQVEKRSRNKQNIIPDS
KEKKQAKKWLKDMIETLTNAVDSIEEKIEEEEEKEKKKDGDMIESHRSRQRKHEEYIDKL
NQVYEFLDNDEGITPQDLEELKEYVEYYVDENEEAEFVEDDDSFETIFKKHKEWEESAPK
EELVDVDEVKDSIKNSDEYDDEDSDEGFDEDLDSDDDDGSSNVDDDEDLSSPISTSSKDD
DKKKKSPPNTTPVVNVNPSITKPSGSNLTVTAVVSKDKKITKQAPPAISTSPNQPSTTQQ
PSGQVTPNTTTPTTTKPSYSDLVKSPKTPLQPQQPTPTNTSTTATTTKQAATTTTTATTA
SGSTTPTSTTIKKPAVSYIDIAQQNKNAPQGHNLTVSISDSNKQQVTTPTVAATTPTTTS
NKNAKQQATTTTTATATTTATKQQPTTKGQPAQPTKKAQTNANQIDGWISSSDDEASNER
QKQSSQAVMNKFFSQQQGSGKQQNKRLGIQGDKLSEQNLKQQQKNKIDKVNSDLKFLILK
KHDARKRMKRKGQLISYGDESDEEVKQEEQKPTTDSTTATTEQNSLKRKKEESDDEDESK
IKVLAKKKKKKKKSNK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggtcgataggaccgtaaaaaaagtgaatgaaggtattgaaaactttgatgaa
ttggaagaaaaagtatatagtgcccaaagttcttcgcaaagggataaatttgaaggagaa
ttgaaaaaggaaattaaaaaactacaacgtctgagagaaacaatacgtggctggatatct
ggtaatgaaattaaagacaaggaattactggtggaaaagaggcaacagattgaaacaaga
atggaaaggttcaagaaatgcgagcagaaaaccaagatgaaggcctattctaaagaagcc
ctgagtaaaagtcaagtcgaaaaacgaagtaggaacaaacaaaatattattcctgactcg
aaagagaagaagcaagctaagaaatggctgaaggatatgatagaaacactgacgaacgct
gttgattcaattgaagaaaaaattgaagaagaagaagaaaaggaaaagaagaaggatgga
gatatgattgaatcgcatcgatcacgtcaaagaaaacatgaggaatatattgataagtta
aaccaagtttacgagtttttggataatgatgaaggtattacacctcaagatttggaagaa
cttaaggaatatgtagaatactatgtagatgaaaatgaagaagctgaatttgtggaagat
gatgattcatttgaaacaatattcaaaaaacataaggaatgggaagaatcagcaccaaag
gaggaactcgtggatgttgatgaagtcaaggatagtattaaaaattctgatgaatatgat
gatgaagattctgatgaagggtttgatgaagacttggattcggatgatgatgatggttca
agtaatgttgacgatgatgaagatttaagttctccaatatcaacatcttcaaaagatgat
gataagaagaagaaatctcctcctaatacaacacctgttgttaatgtgaatccatcgata
acgaaaccttcaggaagtaatctcacagttacagctgttgtatcaaaagacaagaaaatt
accaaacaagcacctccagctatttctacctctcctaaccaaccatccaccacccaacaa
ccaagtggtcaagttactccaaacactaccactccaacaacaactaaaccatcttatagt
gatttagttaagtctccaaaaactcctcttcaaccacaacaaccaactccaaccaatact
tccacaacagcaacaacaacaaaacaagctgctactactactacaacagcaacaacagca
tcaggttctacgactccaacatctaccactatcaaaaagcctgctgtttcatatattgat
attgctcaacaaaataagaatgctccacaaggtcacaatttaacagtttctattagtgat
tcaaataagcaacaagtaacaacaccaacagttgcagctacaacaccaacaacaacaagt
aataagaatgctaaacaacaagctacaacaacaacaacagcaacagcaactacaacagct
acaaagcagcaaccaaccacaaagggtcaacctgctcaaccaaccaaaaaagctcaaact
aatgccaaccaaattgatggatggatttcatcaagtgatgatgaagcatccaatgagaga
caaaaacagtcatctcaagcagtaatgaataagttcttttcacaacaacaaggaagtgga
aaacaacaaaacaaaagattgggaattcaaggcgataaactttccgaacaaaacctaaaa
caacaacaaaaaaacaaaattgacaaagtgaatagtgatttaaaattcttaattttaaag
aaacatgatgctcgtaaaagaatgaaaaggaaaggacaacttatttcttatggagatgaa
tctgatgaagaagtaaaacaagaggaacaaaaaccaacaacagattctacaacagcaaca
acagaacaaaattctcttaaaagaaaaaaggaggaaagtgatgacgaagatgaaagtaaa
attaaagtattagctaaaaagaaaaagaagaaaaagaaaagtaacaaataa
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