Naegleria gruberi: NAEGRDRAFT_79599
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Entry
NAEGRDRAFT_79599 CDS
T01241
Name
(RefSeq) transcription factor IIIC-gamma subunit
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_79599
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
NAEGRDRAFT_79599
TFIIIC, fungi type
NAEGRDRAFT_79599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_8
TPR_2
TPR_19
TPR_1
TPR_14
TPR_17
TPR_12
TPR_7
ANAPC3
TPR_16
TPR_9
DUF6584
NatA_aux_su
Mtf2
DUF1039
CDC45
Motif
Other DBs
NCBI-GeneID:
8850311
NCBI-ProteinID:
XP_002677747
JGI:
Naegr1_79599
UniProt:
D2VE24
LinkDB
All DBs
AA seq
1088 aa
AA seq
DB search
MPPKKNNQPKITAFISKKSSSTNESSSEEPLKLSDLLPPSLASFASSSLIEQSKEHHHGE
HIQIATEHQETFQPPPSSSFLSGTPGLSLPNNDGSLLSLFGGEYLTEIIPIEQDNQHHPT
TLFETNISKSLENQNAPLNISDLMMDDLHIGGIGSGVDSTPSLDELKNLDIGKYIEEQTG
SATNQVQTAMQICNIFREPGNQQNSELLKQATSSLIDQQENESDDDDNRSVMTESSQVTS
ENYKGDDFDEIYGPDEGEGDYDYLDDILKGMLKRKKRKRAMKSKKTRKKKEDKIPKEVKE
MLGEANLEFIGANFSKAVQILLEVIRVCPNISDPYHTLGLIYEELGILDKATDFYLIAGL
LSPTNLEFWNRLSELCISTNKLQLAAYCLRRIYLIDPKNYNARIKQCELFMILNQPQRAI
NGYKSLLKQFPGDVPVVMSLAKIYYELNRVFDAIDVLQEAISRDEQRVDLTLVNMLAELF
INEGWYEKAVKLIERISVQQNCPIEIMPPDISSKYAISQTYLGKLSNEKVESIFEDILKS
PVAEFGDLFFSIAEMYYVVNEFRKALNVYSLLTTSEVYNKASIWLRIAECYKSLNEVDES
IKYCEMVLHVIPDNVEARILLSEIYKDIGDIQKAVDVLEHSGSERAKKDLASLRKSFDKS
SNGNDDDYNSDDDDSDKEGDYSSDEDTEQEKDPDFNPEDIEPSDDDINLPDDMEDEKTEE
QNRTEKVKDIRIMVKKAWILHSTGQHEEFIKTALPVVLSILDLDQENPEWMKELGKRKKR
IILNYDIGLKRQRKKIVDVSKEDGWTWTEALSAMGDYNLYTFIVALCKVLAYCQQNEECL
RILSVLLLNSRSTRKKFTFKSHEEKQRKRQHLRYLYVAVSYNSGFYKRAYNAIRPIISDK
PYSIPLLNLFNKITTRVGNILANHGFMLRLLDKHPQSVPLMLLVGHNCAMSGSHKLAIGE
YFRAYRFMPNEPIISLCLGLSYLNLVMNRRTANRNLHVMQAFTFLYRYFELREGNQEAHF
NLARAYHQLRLYHLATPYYKKVLELSDSGKIQPDSDLKREAAYNLSLIYKESSNYSLVEY
LTEKYLTI
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaagaaaaacaatcaacctaaaataactgcctttatttcaaaaaagtcttct
tcaactaatgaatcatcttccgaagagcctttaaaactgtcagatctactaccaccatca
ttagcttcatttgcatcatcatcattaatagaacaatcaaaggaacatcatcatggagaa
catatacaaattgcaacagaacatcaagaaacctttcaaccaccaccatcatcatcattc
ttatctggaacaccaggattatctttacctaataatgatggttctttattgtcactattt
ggaggagaatacttgactgaaatcattccaattgaacaagataatcaacatcatccaaca
acactttttgaaactaatatttcaaaatcattggaaaatcagaatgctccattaaatatt
agtgatcttatgatggatgatttacatattggtggaattggtagtggagttgattcaacc
ccaagtttggatgaattaaagaatcttgatattggaaaatatattgaagaacaaacaggt
tcagctacaaatcaagtacaaacagcaatgcaaatttgtaacattttcagagaacctggt
aatcaacaaaattcagaattgttaaaacaagcaacaagttccttgatagatcaacaagaa
aatgaaagtgatgatgatgataatagaagtgtaatgacagaatcatctcaagtaacatct
gaaaattataaaggagatgattttgatgaaatttatggaccagatgagggtgaaggagat
tatgattatttggatgatatcttgaaaggaatgttaaaaagaaaaaagagaaagagagca
atgaaatctaaaaaaactaggaaaaagaaggaagacaaaataccaaaagaggttaaagaa
atgttaggtgaagcaaatcttgaatttattggtgcaaatttttcaaaagcagttcaaatt
ttattagaagttattcgtgtttgtccaaatatttctgatccatatcatacactgggtctt
atttatgaagaattgggtattttagataaggcaactgatttttatttaattgctggttta
ctttcaccaacaaatttagagttttggaatagactttcagaattatgcatctcaacaaac
aaacttcaacttgctgcttattgtttgagaagaatttacttaattgatccaaagaattat
aacgcaagaatcaaacaatgtgaacttttcatgatacttaatcaaccacaaagagccatt
aatggatacaaatcacttttgaaacaatttcctggtgatgttccagttgtaatgtcattg
gcaaagatttactatgaacttaatagagtttttgatgctattgatgttttacaagaggca
atttctagagatgaacaacgtgtagatttaactctagtgaacatgctcgcagagttattc
atcaatgaaggttggtatgaaaaggctgtcaaacttattgaaagaattagtgttcaacaa
aattgtccaattgaaattatgccacctgatatttcttcaaaatatgcaatttctcaaacc
tatttaggaaagctttctaatgaaaaagttgaaagtatttttgaagatattttaaaatca
cctgttgcagaatttggtgatttatttttcagtattgcagaaatgtattacgttgtcaat
gaatttaggaaagcacttaatgtttactcactacttacaacaagtgaagtttataataag
gcatcaatttggttaagaattgctgaatgttacaaatctttgaatgaagttgatgaatca
atcaagtattgtgaaatggttctccatgtaattcctgacaatgttgaagctagaatatta
ttgagtgaaatttataaggatattggtgatattcaaaaggctgttgatgttcttgaacat
tctggtagtgaaagagcaaagaaagatttggcctctctcagaaaatcatttgacaagtct
agtaatggtaacgatgatgattacaacagtgatgatgatgatagtgataaagagggagac
tattcatctgatgaagatacagaacaagagaaggatccagattttaaccctgaagatata
gaaccaagtgatgatgacattaatttacctgacgatatggaagatgaaaaaactgaggaa
caaaatagaactgaaaaagttaaagatattagaattatggttaagaaagcttggatttta
cattcgactggacaacatgaggaatttatcaaaactgctcttccagtagttttgagtatt
cttgatcttgatcaggaaaatccagaatggatgaaagaattaggaaagaggaagaaacgt
atcattctcaattatgatattggtctcaagagacaaagaaaaaagattgttgatgtatct
aaggaagatggttggacatggactgaagcattaagtgctatgggagattataatctttat
acttttattgttgctctgtgtaaagtattggcatattgtcaacagaatgaggaatgttta
agaatattatcagttttacttttaaattcaagatccacaagaaaaaagtttacattcaaa
tcacatgaagaaaaacaaagaaagaggcaacatttaagatatttatatgttgctgtttcg
tataatagtggattttacaaacgtgcctataatgcaattcgtccaattatttcagacaaa
ccatacagcataccattacttaatcttttcaataagattacaactagagttggtaatatt
ttagcaaatcatggtttcatgttaagattattggacaaacatccacaatcagttccatta
atgctcctggttggtcataattgtgctatgagtggaagtcacaaattagctattggtgaa
tattttagagcttatagatttatgccaaatgaaccaataattagtttgtgtctaggattg
agttatctcaatttagttatgaatagaagaactgctaatagaaatcttcatgtcatgcaa
gcattcacattcctgtatagatattttgaattacgagagggaaatcaagaagctcacttt
aatttggctcgtgcatatcatcaacttcgtttatatcatttagcaacaccttattataag
aaagtacttgaattatctgattctggtaaaattcaacctgattctgatttgaagagagaa
gctgcttataatttatcattaatttataaggaatcgagtaattattcacttgtagaatat
ttaactgaaaagtatttgacaatttaa
DBGET
integrated database retrieval system
