Naegleria gruberi: NAEGRDRAFT_80913
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Entry
NAEGRDRAFT_80913 CDS
T01241
Name
(RefSeq) nuclear pore complex p62
KO
K14306
nuclear pore complex protein Nup62
Organism
ngr
Naegleria gruberi
Pathway
ngr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NAEGRDRAFT_80913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_80913
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
NAEGRDRAFT_80913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Miga
MscS_porin
Taxilin
DUF3135
DUF3450
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
8864468
NCBI-ProteinID:
XP_002673465
JGI:
Naegr1_80913
UniProt:
D2VQZ0
LinkDB
All DBs
AA seq
736 aa
AA seq
DB search
MFGSSGFNAGGGNPQGNAPGAFSFGNNNSAPTQPATGGGGGFSFGSSTTGGTQPSTTGGF
GQPSAQPPTSGGFAFGSSTTGGTQPSTTGGFGFGSTPSTQPTTGGTTAGGTTGGFAFGNK
PATTATTTQPTTGGMTFGQPSTQPTSTGGTTGGFAFGTQPTTGTTTQPTTGTTGGFNFGS
TTQPSTQPTISTTTTTQPSSGGFNFGSTTTQPTTTQPTTGTATGGTTGGFNFGNTTTGTT
TQPTTGTTTGFKIGTTSTTQPTTGTTGGTTGGFNFGNTTTQPSTGTTTTSSTTQPTTGTT
GGSGGFNFGSTTTTPSTVAQPTTTGTTGGTTGGFNFGNQPKPVTTQPSTTGTTTQPTTTT
TGTTGGGGGFNFGSTATTTTPSTTNAPTSTGTTGGAGGFNFGNKPTTTPTTTTTTGTTGT
TNAGFSFDNKRPSDEGGPNKKRSAGSDISTSGNTTTTGTTGGGFTLNTGSTTTPSSTQPT
TGTTGAGGFNFTAGSDTSKKPTLPSLDTTNSTTTATTGATTTAQPTTATTTQPKPITTTT
PQIDTSQTLLGNSTVEEIINKWNTDLSTDIKDFHKAANLVSKWDKDIMENESKLIGLNDQ
VNRITAEQSELKGQLDMIDSQQNNLENIIKGLEDYIEKNQSIYDSSKRSQSDREREETYK
TAESINCQLDAMQQTLDEMVMQLNKTFEQSVDPHSDFTRIVQVMNNHLACLQWIEQQASG
LDSDIQTSSNTLKRLQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaagttctggttttaatgccggtggtggcaatcctcaaggaaatgctcctgga
gccttttcatttggtaataataactctgctccaacacaaccagctactggtggtggtggt
ggattttcttttggatcatctacaactggaggtacacaaccatcaacaactggaggattc
ggacaaccttctgcacaaccaccaacttctggaggatttgcttttggatcatctacaact
ggaggtacacaaccatctacaactggaggatttggttttggttcaacaccttctacccaa
ccaacaactggaggaacaactgctggaggaaccacaggtggatttgcttttggaaataag
ccagctaccactgcaactacaacacaaccaaccactggaggaatgactttcggtcaacct
tctacacaaccaacaagtactggaggaaccacaggaggatttgcttttggtactcagcca
acaactggaacaactacacaaccaacaactggaaccactggtggatttaactttggctct
actacacaaccttccacacaacctactatcagcacaacaaccactacacaaccatctagt
ggaggattcaattttggttccacaactactcaaccaacaaccacacaaccaactacagga
acagctactgggggaactacaggtggatttaactttggaaatactacaactggaacaact
acacaacctactacaggtacaactactggattcaaaatcggaactacttcaacaactcaa
ccaactactggaaccactggaggaaccactggtggatttaactttggaaatactacaacc
caaccatcaactggtactacaactactagctcaacaactcaaccaactactggtaccacg
ggaggatctggtggatttaactttggttctaccacaactactccatcaacagtagcccaa
ccaactactacaggtacaactggaggaaccacaggaggatttaactttggaaatcaacca
aaacctgtcacaacacaaccatcaacaactggtactacaacacaaccaaccactactact
actggtacaacaggaggaggtggaggattcaatttcggttctactgctactaccactacc
ccatcaaccaccaacgctccaactagtacaggaacaacaggaggtgctggaggattcaac
tttggaaataagccaacaacaactccaactactacaaccactacaggtacaacaggaact
accaatgcaggcttctcatttgataataagagaccatccgatgagggaggtccaaataag
aagagatcagctggttctgacatttccacatcaggaaatactacaactacaggcactact
ggaggtggattcacattaaacactggatcaacaacaactccatcctctactcaaccaaca
acaggtaccacaggagctggaggtttcaactttacagctggatctgatacaagcaaaaag
ccaacattaccatctttggatacaacaaattctactaccactgctactaccggagctact
acaacagctcaaccaaccacagctaccacaactcaaccaaaacctattactaccacaact
cctcaaatagatacatcacaaactcttttaggaaatagtactgtcgaagaaataattaac
aaatggaatacagatctttccactgatatcaaagatttccacaaagcagctaaccttgtt
tcaaagtgggataaggatattatggaaaatgaatctaagcttattggacttaacgatcaa
gttaatagaattacagcagaacaaagtgaattgaaaggacaattagacatgatagactct
caacaaaataatttggaaaatatcatcaagggattagaagattacattgaaaagaatcaa
tcaatatatgattctagtaagaggtcacaatcagacagggagagagaagaaacatacaag
actgccgaatctattaattgccaactcgatgccatgcaacaaactttagatgaaatggtc
atgcaacttaacaagacctttgaacaatctgtggatccacattctgactttactcgtatt
gtgcaagtaatgaataatcacttggcatgcttacaatggattgaacaacaagcatctggt
cttgactctgacattcaaacaagttcgaatactttgaaacgacttcaataa
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