Nocardiopsis gilva: CDO52_22145 Help Entry CDO52_22145       CDS       T05022                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism ngv  Nocardiopsis gilva Pathway ngv03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:ngv00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     CDO52_22145  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ngv03400]     CDO52_22145 Enzymes [BR:ngv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      CDO52_22145 DNA repair and recombination proteins [BR:ngv03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      CDO52_22145 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C Motif Other DBs NCBI-ProteinID:  ASU85132 UniProt:  A0A223SAH3 LinkDB All DBs Position complement(4977456..4978409) Genome browser AA seq 317 aa AA seqDB search MTGWRQPMLATLTERRFSDPNWLFERKFDGMRALSVRDDDSKDGAPQLWSRNEKRIDDSY PELVDALAERGGSRFVADGEIVAFDGEQTSFARLQARIHLTDPERIAATGVAAYYYLFDL LSHDGEDLTGLPLRKRKRILRDVFDFRDPLRFAPHRNTDGEAYYREACERGWEGLIAKRA DAPYRGGRSTDWLKFKCVRDQEFVVGGFTDPQRSRVGFGALLVGYHDGSGRFRYAGKVGT GYDNTTLRSLRERMDGMTRRESPFADAVRERGAHWIHPDLVVQVGFTEWTTDARLRHPRY LGMRTDKSAADVVRETS NT seq 954 nt NT seq  +upstreamnt  +downstreamnt atgaccggctggcggcaacccatgctcgcgacgctcaccgagcggcggttctccgatccg aactggctgttcgagcgcaagttcgacggcatgcgcgcactgtccgtccgggacgatgac agcaaggatggcgccccgcagctgtggtcgcgcaacgagaagcgcatcgacgacagctac ccggagctggtcgacgcgctcgccgagcgtggcggctcccggttcgtcgccgacggggag atcgtcgcgttcgacggtgagcagacgagcttcgcccggctgcaggcccgtatccacctg acggaccctgagcgcatcgcggccaccggggtggccgcctactactacctgttcgacctg ctgtcccacgacggcgaggatctgactgggctgccgctgcggaaacgcaagcggatcctg cgggacgtgttcgatttccgcgatccgttacggttcgccccgcaccgcaacaccgatggt gaggcctactaccgggaggcgtgcgagcgtggctgggagggcctgatcgccaagcgcgcg gacgcaccgtatcgcggcggacggtcgaccgactggctgaagttcaagtgcgtgcgtgac caggagttcgtggtcggcggcttcaccgacccgcagcgctcgcgcgtcgggttcggcgcg ctgctcgtcggttaccacgacgggtccggccggttccgctacgcgggcaaggtcggcacc ggctacgacaacacgaccctgcgttcgctgcgcgaacggatggacggcatgacccgccgg gagagccccttcgccgacgcggtgcgggagcggggcgcgcattggatccacccggacctg gtggtgcaggtcggtttcactgagtggaccaccgacgcccggctgcgccacccgcgctac ctcgggatgcgcaccgacaagtcggcggccgacgtcgtgagggagacaagctga

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