Fusarium vanettenii: NECHADRAFT_103209 Help Entry NECHADRAFT_103209 CDS       T01612                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism nhe  Fusarium vanettenii Pathway nhe03020   RNA polymerase nhe03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:nhe00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     NECHADRAFT_103209   09124 Replication and repair    03420 Nucleotide excision repair     NECHADRAFT_103209  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nhe03021]     NECHADRAFT_103209    03400 DNA repair and recombination proteins [BR:nhe03400]     NECHADRAFT_103209 Enzymes [BR:nhe01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      NECHADRAFT_103209 Transcription machinery [BR:nhe03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      NECHADRAFT_103209 DNA repair and recombination proteins [BR:nhe03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       NECHADRAFT_103209 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DIRP RNA_pol_Rpb1_R MafB Motif Other DBs NCBI-GeneID:  9664522 NCBI-ProteinID:  XP_003054466 JGI:  103209 UniProt:  C7YI77 LinkDB All DBs Position 1 AA seq 1750 aa AA seqDB search MANLIFTHSSAPLKTVEEIQFGLMSPEEIKNMSVCHILYPETMEENKTKPRDGGLNDPLL GSIDRQFRCKTCTQAMGECPGHFGHIELAKPVYHPGFIKKVKKILEIVCHNCSKVLADTR DPEFAAAIATRDPKVRFSRVWEVCKKKRRCDNEEPKQKDEEFAPGMKLGPVEGHGGCGNV QPNVRQAALQLKAAFDVVEEGGGKRRETTPITPEMAHNILRRITEEDLRDMGLNSDYARP EWMVLTVLPVPPPPVRPSISMDGTGTGMRNEDDLTYKLGDIIRANGNVKQAIREGSPAHI ARDFEELLQYHVATYMDNDIAGQPRALQKSGRPVKAIRARLKGKEGRLRGNLMGKRVDFS ARTVITGDANLSLHEVGVPRSIARTLTYPETVTPYNIGRLHQYVENGPNEHPGAKYVIRA DGQRIDLRHHRRAGAISLEYGWKVERHLIDGDYIIFNRQPSLHKESMMGHRVRVMPYSTF RLNLSVTSPYNADFDGDEMNLHVPQSEETRAEVKELCLVPLNIVSPQKNGPLMGIVQDSL AGVYKLCRRDTFLTKEQIMNSMLWVPNWDGVIPQPAILKPRPRWTGKQLISMVIPKEVTL HNGTDKKEDAPLKDEGILIQAGQLMYGLPTKKIVGAAAGGIVHISYNELGAEGAMAFLNG VQQVVTYWLLNNGHSIGIGDTIPDKATIEKVQVHIDEEKAEVARLTAMATANELEALPGM NVRATFENKVSMALNQARDKAGTTTQKSLKDSNNAVTMASSGSKGSSINISQMTALVGQQ IVEGKRIPFGFKYRTLPHFTKDDYSPEARGFVENSYLRGLTPSEFFFHAMAGREGLIDTA VKTAETGYIQRRLVKALEDLSARYDGTVRNSLGDVVQFLYGEDGLDAMCIEKQKLGILNM SNAAFKAKYRLDLANPPEWFKSDYEFGNELTGDRPSMALLDTEWEALLKDRRVIRQINKA KMNEEMMQLPLNITRIIESAKRVFNVKANDRSNLRPSDVIPSVQNLLDHMKIVRGTDPIS VEADANATILFKGLLRSRLAFKEVVKEHRLNKLAFDHVIGELQNRWDRAFVSPGEMVGVL AAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNLAKNIKTPSMAVYLNTPLARQ EQAKKLRSMVEYTNLRSVTAVTEIYYDPDIQSTNIPEDMDMVESYFMIPDDTQVSIDQQS RWLLRITLDRQKLLDKEIRIDDVAQRIKEEYPTDLAVIFSDNNADEQVIRIRTVSAGDKD EDGEGRMEDDVMLKRLEAHLLDTLTLRGVNGVERAFLTKGTRLVESPDGALLAIKDDPRC TQWYLDTSGSALRDVLAVDGVDASRTYTNDLWQVVEVFGIEAARSALVKELTNVLAFDGS YVNHRHIALLTDVMTYRGSISAVTRHGINRADTGALMRCSFEETVEILLEAAASGELDDC RGISENVMLGQMAPMGTGNFDVLLDPKMLETVISDNSRMGLMPGMPVKGGEIEGAATPYD TGSPMADSGYLSLSSPAAGNFSPIQGAGSDTPAGFGNTEYGFGGSTAMSPYAMRGGTSPF TTSPTSPFGPGGGYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPT SPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGT TSPSYSPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSPAFSPRTPGPGSSGN QYSPNSPSNE NT seq 5253 nt NT seq  +upstreamnt  +downstreamnt atggcgaacctcatcttcacccactcgagcgctccgctcaagacagtggaagagattcag ttcggactgatgtcccccgaggagatcaagaacatgagtgtctgccacatcctctacccc gagaccatggaggagaacaaaaccaagccccgcgacggaggccttaatgacccgctcctt ggatctatcgaccgacaattccgatgcaagacctgcactcaagctatgggcgagtgccct ggtcacttcggccatatcgaactcgcgaaacccgtctaccaccctggcttcatcaagaag gtgaagaagattctggagattgtctgccacaactgtagcaaagtgttagccgatactaga gatcctgagttcgccgcagctatcgctactcgagatcccaaagttcgcttcagtcgcgtc tgggaagtctgtaaaaagaagagaagatgtgacaacgaggagccaaagcagaaggatgag gaattcgccccaggcatgaagttgggtcctgtggaaggccacggcggttgcggcaacgtc cagcccaacgtccgacaggccgccttgcagttgaaggctgctttcgacgttgtggaggag ggaggaggcaagcgacgagagacgacgcccatcactcccgagatggctcacaacatcttg aggcgaatcaccgaggaagaccttcgggacatgggtctcaactcggactacgcccgcccc gagtggatggttctcaccgttcttccagtgcccccgcctcccgtccgacccagtatctcc atggacggcaccggcaccggcatgcgcaacgaagatgatttgacatacaagctgggtgat atcatccgcgccaatggaaatgtcaagcaggccatccgtgaaggatcacctgcacacatt gccagggactttgaggagctactgcagtatcacgttgccacctacatggacaatgatatt gctggacagcctcgcgctctgcagaagagtggacgtcccgtcaaagccattcgagcacgc ctaaagggcaaggaaggtcgtctgcgaggtaacctgatgggtaagcgtgtcgacttttcg gcacgtactgtcatcactggtgatgccaatctttcacttcacgaagtcggtgttcctcgc agcatcgcccgaactctcacataccccgaaactgttacaccttacaacatcggtcggctg catcagtatgtcgagaacggccccaacgagcaccccggtgccaagtacgtcattcgcgca gatggtcaacgtattgatctgcggcaccaccgccgcgcaggtgctatctctcttgagtac ggctggaaggtcgagcgtcatttgattgatggtgactatattatcttcaaccgtcagccc tctctgcacaaggaatccatgatgggacatcgtgtccgcgtcatgccgtactctaccttc cgtctgaacctgtctgtcacatctccttacaacgccgatttcgatggtgacgagatgaac ctgcacgttcctcagagcgaagagactcgcgccgaagtcaaggagctctgcctggtgcct ctcaacattgtttcaccccagaagaacggtcccctcatgggtattgtccaggattcgctt gctggagtgtacaagctctgccgacgagacactttcctcaccaaggagcagatcatgaac agcatgctttgggttcctaactgggatggtgtcatccctcagcctgccattctcaagcca cgccctcggtggactggcaagcagctcatcagcatggtcattcccaaggaagtgacccta cacaacggcaccgacaagaaggaggatgccccccttaaggacgagggtatcctaattcaa gctggtcaactcatgtacggtcttcccaccaagaagattgttggtgcagcggctggtggc attgtccacatcagttacaacgagctgggagctgagggtgccatggcattcttgaacggt gttcagcaggttgtcacatactggctgctcaacaacggtcacagtatcggtatcggtgac acgattcccgacaaggcaaccattgaaaaggttcaggtgcacattgatgaagagaaggct gaagtcgctcgcctcaccgctatggctactgccaacgagcttgaggctctccccggtatg aatgttcgagcaacattcgaaaacaaggtctcgatggctcttaaccaggctcgtgacaag gccggtactacgacacagaagagtttgaaggactccaacaacgccgtcaccatggcttca tcaggttccaagggttcatccatcaacatctcacagatgactgcgcttgtgggtcagcag attgtcgaaggaaagcgtattcccttcggattcaagtatcgcacactgccccatttcacc aaggatgattactcgcccgaagcccgtggtttcgtcgagaactcgtaccttcgtggtctg actccttctgagttcttcttccacgccatggctggtcgagaaggtctcattgatactgca gtcaagactgccgagacaggttatattcagcgacgactggtcaaggctctggaagacctg tccgcgcgctacgatggaaccgtccgaaactcattgggcgatgttgtgcaattcctctac ggcgaagatggtctggatgctatgtgcatcgagaagcagaagctggggatcctcaacatg tccaatgctgccttcaaggccaagtaccgactggatcttgccaaccctcccgagtggttc aagtcggactacgaatttggtaacgagttgactggcgacaggccttcgatggcccttctt gatactgagtgggaggctttgctcaaggaccgtcgggtgatccgacagatcaacaaagcc aagatgaacgaggaaatgatgcagctgccgctcaacattactcgaatcatcgaatcagcc aagcgtgtgttcaacgtcaaggccaacgatcgcagcaacctgcgtccctctgacgttatc ccttccgtgcaaaacttgctcgaccacatgaagattgttcgcggtaccgaccccatctca gtagaggcagatgcgaatgccaccattctcttcaagggcctgctacgctctcgtctggca ttcaaggaagtggtcaaggagcatcgcctgaacaagctcgcattcgaccatgttatcggt gagcttcaaaaccgatgggatcgggcctttgtcagccctggtgaaatggttggtgttttg gctgctcagtctattggtgagcctgctactcagatgacactgaacacattccatttcgct ggtgtgtcttccaagaacgtcactctgggtgtgccccgtctcaaggaaattctcaacttg gccaagaacatcaagacgcctagcatggctgtgtatctcaacacaccgcttgctcgacag gaacaggccaagaagctccgaagtatggttgagtataccaaccttcgctctgtgacagcg gttaccgagatctactacgatcccgatatccagtcaaccaacattcctgaggatatggat atggtcgagtcttacttcatgattcccgatgacacgcaggtcagcatcgaccaacagtcg agatggcttctgcgtatcacacttgatcgacagaagctactcgacaaggagatcaggatc gacgacgttgctcagcgcatcaaggaggagtaccccactgatctggctgtcatcttcagt gacaacaacgccgacgagcaggtgatccgcattcgaactgtctctgctggtgacaaggac gaagatggcgaaggccgaatggaggacgatgtcatgctgaagcgacttgaggcccatctt ctcgataccctcactcttcgtggtgtcaacggcgtcgagcgtgctttccttaccaaggga accagactcgttgagagccccgatggagcactgcttgccatcaaggacgacccacgatgc acccagtggtacctggatacgagtggttcggcgctgcgtgatgtgctggcagttgacggt gttgacgcgagccggacatacaccaacgacctgtggcaagtggttgaggtgtttggtatc gaggcggctcgttccgcactggtgaaggagttgaccaacgtgttggctttcgacggttcc tacgtcaaccatcgtcacattgcgctactgacagatgtcatgacgtacagaggttccatc tcggctgttactcgacacggtatcaaccgcgctgacactggtgctctgatgcgttgttcc ttcgaggagacggtcgagattctgctcgaggctgcagcttcaggcgaactggatgactgc cgtggtatctcggagaacgtcatgctgggccagatggcgccaatgggcacaggcaacttt gatgtcctcctggaccccaagatgctggagactgtcatctcggacaactctcgcatgggc ttgatgcctggcatgcctgtcaagggaggagagatcgagggagcagcgacgccttacgac acagggtctcccatggctgactcaggctacctcagcctcagctcgccggcagctggtaac ttctctcctatccagggtgctggatcggatactcctgctggcttcggcaacactgagtac ggttttggtggatcgactgcgatgagcccgtacgcgatgcgcggaggaaccagccccttc accacatcgccaacgtcgccattcggacctggaggaggctactcgccaacgtcacccaat gcctactcgcccacatcgcctcttgtggatggtggcatggggggtcggtatgccacctcg ccttcgttcagcccgtcgtcgccgtcgttctcgcctacgtcacccatggtgcggccgaca agccccgcgagccccaactacagcccgtcgtcgccgaactactcacctgcttcgccatcg tcgcctcgacactactcgcctacatcgccggcgcagttcaactctcccacgtctcccaac tactcgccggcaagccccaactacagccctgcgtcgcccaaccttcacgcaggcggaacc acctcgccgtcgtactcaccggcatctcccacgtggtctcctacgtctcccgaggcctac tcgccaacaagcccgtaccagaggagccctggtgcgcagcagtcgccaaccagcccaagc tactcgcccacatcgcctgctttctctcctcgtacacctggtccgggatcttctggaaac cagtattctcccaactcgccgtcaaacgaataa

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