Fusarium vanettenii: NECHADRAFT_46674
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Entry
NECHADRAFT_46674 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
nhe
Fusarium vanettenii
Pathway
nhe03013
Nucleocytoplasmic transport
nhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NECHADRAFT_46674
09122 Translation
03013 Nucleocytoplasmic transport
NECHADRAFT_46674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_46674
03041 Spliceosome [BR:
nhe03041
]
NECHADRAFT_46674
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
NECHADRAFT_46674
Spliceosome [BR:
nhe03041
]
Complex C
Other components
EJC/TREX
NECHADRAFT_46674
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NECHADRAFT_46674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
MMR_HSR1
AAA_16
AAA_18
RsgA_GTPase
NTPase_1
AAA_22
nSTAND3
AAA_29
T2SSE
AAA_33
AAA_14
AAA_28
AAA_7
RNA_helicase
cobW
AAA_23
Motif
Other DBs
NCBI-GeneID:
9665662
NCBI-ProteinID:
XP_003049002
JGI:
46674
UniProt:
C7YZ20
LinkDB
All DBs
Position
8
AA seq
800 aa
AA seq
DB search
MAVLGADNPAAPAVAAFDALLQELLTEAERVKEVSTIEPALNKSDFDDLSGRVSSTAAQL
PQLEGDKDAKEAKSRQYGIIETAARDIFSNLISTTTIDSPDFVKVWNLLDILSILSDDGQ
CDPALLFWLAEELLDSQTISGCRKIFDFLESRRERITAKHFKQKQLIILRSCNELLRRLS
RAEDTAFCGRVFIFMFQSFPLGDKSSVNLRGEYHVENITTYETTIAENDSNMDVDTPTGG
SKSTSRSNDAKKGDKEKPLSTDALYPLFWSLQESFSQPKRLFETANLASFKESLGATMKF
FQTIHNDSRRSLKRKRDSGEEDENSNAFNPKYLTSKDLFDLEISDLSFRRHVLVQALIIM
DFLLSLSSPAREKLSSSLATNKAVMYGDQTLSEEDTKWANDMKKTIADYLRQGADGPYFY
RMVETVLARDKNWVRWKIEGCHAIKRDPVSPASFVEAKANVQRMATSKRLRAVPMGSVSL
DFLREQDEETAMDRLKAKERFQVPDLDSFKRKIADDDFEIEMSNNPQAKAAAIAGKASKS
WRALRIAARTKLAAFDKIDDPQNINVVFEELTEGDDDVEPVASEEDMPSNRDAIIISGPT
GVGKSTIVNKLMEERKGVFAPVVRHTTREPLDGEVKGKTFHFVKQQEFNQLRDGDRLIEA
GTRDGVDYGTSTKAIDAVVEAGKIPIIELDLEATQYAKDMDFQARYILIKPSSPEAFEER
LKAAGKEESVIQETIKQLPTELDPAKLGELFDTTIADDDVDAAARALGDYIYEKGNAEED
TAMKDDEEATNAKEAAMTDA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgggtgcggacaatccggctgcgccagccgtcgcggctttcgatgcgctg
cttcaggagcttcttacagaggcggagagggtgaaggaggtgtccaccatcgaacccgcg
ttgaacaagtccgactttgacgatctatccggacgagtatcatcgacagcggcccagctt
ccccagttggaaggtgacaaagacgccaaagaggccaagtcaaggcaatacggcatcatc
gaaactgccgctcgcgatatcttcagcaatcttatttcaactactaccatcgattctccc
gacttcgtcaaggtgtggaacctactcgatatcctttcgatcctctccgatgatgggcaa
tgcgaccctgctcttctgttctggttggctgaggagctactggacagtcaaacgatctcg
ggatgccgcaagatctttgactttcttgaatcgagacgggaacgaattacagccaaacac
tttaagcaaaagcagctgattattctacggagttgcaacgagctattgcgcagactatcc
cgcgccgaagacactgccttctgtggccgggtcttcatcttcatgttccagagcttcccg
cttggcgacaagagctcagtgaacctacggggcgaataccatgttgagaacatcacgaca
tatgagaccaccatagccgaaaatgattccaatatggacgtggatacgccgactggaggc
tccaagtcaacgtccagatcaaatgacgccaagaaaggagataaagagaaaccattgtcg
actgatgcgttgtaccccttgttttggtcacttcaagagagtttcagccaaccaaagaga
ctgtttgagaccgcaaatctcgcatctttcaaagaaagtcttggtgctacaatgaagttc
tttcaaacaatacacaacgactctaggcgaagcctcaaacgcaagagagacagcggtgaa
gaagacgagaactcgaatgctttcaatccaaaatacctaactagtaaagatctattcgac
ctcgagatttccgatctgtccttccgccgccatgtgttggttcaggccctcatcatcatg
gactttcttctctctctatcctctccagcgcgagagaagctctcgtcgtctctggccacg
aataaggccgtcatgtacggagaccaaacgctgagcgaggaagataccaaatgggcaaac
gacatgaagaagacaattgcagactacctccgacaaggcgctgacgggccctacttctat
cgaatggtggaaactgtgttggctcgagataagaactgggttcgatggaagattgagggc
tgccatgccattaagcgtgaccccgtctccccggcaagcttcgtcgaggcaaaggccaat
gttcaacgcatggccaccagcaagcgattaagagcagttcccatgggctccgtgtcgctt
gactttctccgtgagcaggacgaggagacggccatggatcggctcaaagcaaaggagagg
ttccaagtcccagacctggacagcttcaagcgcaagattgcggacgacgactttgagatc
gaaatgtcaaacaacccgcaagcaaaagctgccgctatcgccggcaaggctagcaagagt
tggagggcgttacgcattgctgcccgcacgaaactggctgcgttcgacaagattgacgat
ccccagaacatcaatgtcgtgtttgaggagctcaccgaaggcgatgacgacgttgagccc
gtagccagcgaagaggacatgcccagcaaccgagacgccatcatcatctcgggtcccact
ggtgttggcaagtctactatcgtcaacaagttgatggaagagcgcaagggtgtgttcgca
cccgtggttcgacatactacacgtgaaccccttgacggagaggtgaagggcaagacattc
cactttgtcaagcaacaagagtttaaccagctccgagacggtgatcgcttgatagaggct
ggcactcgtgatggtgtcgactacggaacaagcaccaaggccatcgatgctgttgtggaa
gcgggaaagattcccataatcgagctggacctcgaggccacacagtacgccaaggacatg
gatttccaggcccggtacattctcatcaagccttctagccctgaagctttcgaagagcga
ctcaaggctgcaggcaaggaagagtctgtcatccaagagaccatcaagcagctacccaca
gagctcgacccagctaagctaggtgagcttttcgacaccaccatcgcagatgacgatgtg
gacgcagcagccagggcgcttggagactacatctacgaaaaggggaacgcggaggaagac
accgctatgaaggacgatgaggaagctacaaatgcgaaggaagctgccatgacagacgca
tag
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integrated database retrieval system
