Fusarium vanettenii: NECHADRAFT_91372
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Entry
NECHADRAFT_91372 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
nhe
Fusarium vanettenii
Pathway
nhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NECHADRAFT_91372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nhe03000
]
NECHADRAFT_91372
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_91372
04121 Ubiquitin system [BR:
nhe04121
]
NECHADRAFT_91372
Enzymes [BR:
nhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
NECHADRAFT_91372
Transcription factors [BR:
nhe03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
NECHADRAFT_91372
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NECHADRAFT_91372
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NECHADRAFT_91372
Ubiquitin system [BR:
nhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
NECHADRAFT_91372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Rtf2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
9678632
NCBI-ProteinID:
XP_003046243
JGI:
91372
UniProt:
C7Z5J6
LinkDB
All DBs
Position
2
AA seq
1550 aa
AA seq
DB search
MAPQDSFIEEEEDTCPLCIEEFDLSDRNFRPCPCGYQNNMNGLCPACRRPYDEKTIQWKV
VTQEEVAEFRANIQKNQKKRAQEQRQKEVQKREAEKENRKNLIGVRVVQKNLVYITGLAP
TVREDELLKTLRKPEFFGQYGNIQKISISNRKSSDGQHQSLGIYVTFERPEEATRCIQAV
HGSQNGDRILKAQHGTTKYCSAWLKNEKCGNPGCMFLHEQGDEEDSYSRQDLSSMNSIHT
QRPLPGGGSSRSASRQQAPQPTPPPVVSHPMTRSVSKEGSENGVDGSALPSSANWARNPQ
RSRRGSHATSGAASSPAVSMSLPVTAEAVPEEAVEDTQEPEAGPSIVSKPKEPEPTPEPI
KETKGLPESTLKALLKALQSCSLPRVVDPDSDDLGPPLFDVRGGEKRKAMREEEDSRLTG
EQEEAAEAREPSEGEPETGGSLALGGEPEDRDTTADSRGFDRRPSTQPPIQRSTTDGIFG
PALTGPNFNQSSGNPGSRSMTPQQLFLRSQSGFNDVPPGISNQGQGSTFQGQGHNRQSSR
FSFANDNASSATNVKLAANPRIMAQQSSMMPNSFQSQGNNQFYGTSMPGPPPGLKSTGTP
PSMFGQFGGGFGGAPKDNSTELLQSLINRRGAGNNQAHDAGKPPASGHPASLYGNQPGAF
QDMGSKQKKKGKKHRHANTSSSGGSGLVDLADPSILQARMQHQSQGNAGVGQGLFGGQSQ
VSHKRILIQQAVCEINAAQKASFASGVIFVHQRPRAHEGSGQASHHRLPQALMYVNNVET
ARLGLAVTFDDELPSLDEARNSVDALVADDPITELDGRRSVPPGLALPPGLPTNISRPPS
TPGSSRLHHVVPALPKVPPPGFPQGALTPEHSPRKPVTPSSEAKKNLKSLAVESGLSKEI
TAQSQTKQMKGTALQDEDFPALDALKNKDRPSTPTPKATPKAKRQAEKIVDKLLAKAGSS
LETKSQDVKPAQIAKTAEKKPVSIDTRTPGASPSKAGESSATTEKSTAELSAAFPPLPTP
AAAGISSPITRTAPKTLRVVPTQRVEAPAPASPALTMASVALSATSRVISASYRPETPVS
EMVSDTASVISASVTHSRASSPPPSRIGSAAVRTTTKSQQRKQRKDALKQETKLIAEAPK
EPEEHAPVLGRKKKQKKEKPVKTPQPSPATPVQEPAKAEPTPTEPSVPEQPKEKEPEEKP
VKSKAAQKKAAKGKGKAKEVELELAPTPQSPPQEPATTEPETPEVPEKPQPGPPSVFTEI
KNALWSSSIDKLHLLKPISGSSSRTDPNSANSNANKAGHCKDCSCKCGEIQDEDLAALRA
GKPVRKQFHVDGSRMLITPNGDCIRGLTPEEEDAFLELQAAIAATAENPGAFIAPRHQPG
SGAFSLIKGRAVPNGRPNIFPATAQPQSQDPIGKLQREDALSYINQYVLPRLNLGATNMG
FPKGASPTKDAAAASLNSLAPYFYGPDAAAGVGIYTPPDGARAMQDFSSAGMSSEERGKN
FGMGVSGMPLMSVEDAEGALAAARRETEKLEKGLNQVIRRNRRLLLGNSN
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccaagattctttcatagaagaggaggaggatacctgccctctttgtatcgag
gagtttgatctctccgataggaattttcgaccatgtccttgcggctaccagaataatatg
aatgggctatgtcccgcgtgtcgacgaccctacgatgagaagaccatacagtggaaagtc
gtgacgcaggaagaggtcgccgagttccgtgccaacatacaaaagaaccaaaagaagcga
gctcaagaacaacgacagaaggaagtacagaaacgcgaggccgagaaggagaaccgtaag
aatctcatcggagtgcgcgtcgtgcagaagaacttggtctatatcacaggcctcgccccc
accgtgcgcgaagacgaactactcaagacgttgcgaaagcccgaattcttcggccagtac
ggcaacatccagaagatttcgattagtaaccgaaagagctcggatggccaacaccagtcg
ctcggcatttacgtgacgtttgagcgccccgaagaagcgacacgttgcatccaggccgtc
cacggttctcagaacggtgaccgaattctcaaggcccagcatggcacgaccaaatactgc
tctgcttggctcaagaacgagaaatgcggcaaccctggatgcatgttcttgcacgaacaa
ggtgacgaggaggatagctattcgagacaagacctgtcgtccatgaacagcatccacact
cagcggcctttacctggcggtgggtcctcgaggtctgcctctcgacagcaggcccctcaa
cccacgccgccacccgtcgtatcccatcccatgactcgctctgttagtaaggaagggtcg
gagaatggcgtcgatggatcggcactcccgtcatctgccaactgggcgcggaatcctcag
cgaagccgtaggggtagccacgctactagtggtgctgcgtccagccctgctgtttcgatg
tcgttgcctgttaccgcagaggctgttccggaggaggcagtggaggatacccaggagccc
gaagctggcccatcgatagtcagcaagccgaaggagcctgagcctacgcctgagccaatc
aaagaaaccaagggactccccgagagcaccctcaaggcccttttgaaggcgctgcagagt
tgctctcttcctcgtgttgttgaccccgattcagacgatctcggcccacccttgttcgac
gtccgtggtggtgaaaagcgcaaggctatgcgcgaggaggaggactcccgtttaaccgga
gagcaagaggaggctgccgaggctcgcgagccttcagagggagaacctgagacgggtgga
agcttggcccttggaggtgaaccagaggatcgcgacacaactgctgacagccgaggcttt
gatcgtcggcccagcactcagcctcctatccaacgaagtacgaccgatggtatatttgga
cctgccctgactggacccaattttaaccaaagctcaggcaacccaggctcgcggtccatg
acacctcaacaactcttccttcgatcccagagcggattcaacgatgtccctcctggcatc
tccaaccaaggacaaggcagcacctttcagggacaaggtcacaaccgccaatcttcccga
tttagctttgccaatgacaatgccagctcggctaccaatgtcaagcttgctgctaacccg
cgcatcatggctcagcagtcgtccatgatgcccaactcgttccagtcccagggtaacaac
cagttctatggcacctcgatgccaggacctccccctggcctcaagtcaactggcactcct
cctagcatgtttggccagtttggtggtggatttggaggtgcacccaaggacaactcgact
gagcttcttcaaagtttgatcaaccgcaggggggcaggcaataaccaggcccatgatgcg
ggaaagcctcctgcttccggccatccggcgtcgctctacggtaaccagcccggagcattc
caagacatgggttccaagcagaagaagaaggggaagaagcacagacatgctaacacttcc
tcctctggggggagtggtttagtagatcttgcagacccgagtatcctgcaggcgcgaatg
cagcaccagtctcagggcaacgccggagttggacagggcttgtttggaggtcagagtcaa
gtcagtcacaagcgcattttgattcagcaggcagtttgcgagatcaacgctgcgcagaag
gccagctttgcatcaggcgtcatcttcgtccatcaacgaccacgcgcgcatgagggttca
ggtcaggcaagccatcatcgtcttccacaagcccttatgtatgttaacaatgtcgaaacc
gcccgcctaggcttggcggttacctttgatgacgagctaccctctctcgacgaggccagg
aattcagttgatgcgctggtcgcagatgatcccatcacggagttggatggacgccgttca
gtacccccaggcctagcccttccgccaggtctacctacgaacatctccaggcccccgtct
acccctggctcctcgagacttcaccacgttgtccctgccctgcccaaggttccacctcca
ggattcccacagggtgccttgactccggaacactcgccccgaaagccagtcacgccaagc
tccgaagccaagaagaaccttaagtctcttgcggtcgagagtggcttgtcaaaggagatc
acggcacagtcgcaaactaagcagatgaagggaaccgccttgcaagacgaggacttcccg
gctttggatgcactgaagaataaggatcggcctagcacaccgacaccaaaggcaaccccc
aaggctaagagacaggcagagaagattgtcgacaagcttctggcaaaggccgggtctagc
ctggagaccaagagtcaggatgtgaagccggcgcaaatcgccaaaacggccgagaagaag
cctgtttctattgatactcggaccccaggagcttcgccctccaaggctggggagtcatcg
gcaacaactgagaagtcgacggcagaactctctgctgctttcccacctctccctacccct
gccgccgccggtatttcatcccctattactcgcactgcacccaagacgttgcgtgtcgtt
cctacgcaaagagtagaggcccccgcgccagcttcccctgccttgacgatggcctcagtc
gcattgtcggcgacatctagagtcatctcggcttcttacagacccgaaacaccagtcagc
gagatggttagtgacaccgcctcggtgatttcggcctctgtgacccattcccgcgcaagc
tctccacctccaagcaggattggatctgcggcggtgagaacgacgaccaagagccagcaa
agaaagcagcgcaaggatgccttgaagcaggagaccaagctcattgctgaagccccgaag
gaaccggaggagcatgcaccggtccttggacgaaagaagaagcagaagaaggagaagcct
gtcaagacaccccagcccagtcctgcgacacctgtccaggagccagccaaggctgagccc
actcctacagagccttctgtgccagagcaacccaaggagaaggagccggaagagaagccc
gtcaagagcaaggctgctcagaagaaggctgccaagggcaaaggcaaggcaaaggaggtt
gagttagagttggctcctacgccgcagtcacctccccaggagcctgctacgactgagcct
gagacccctgaagtgccagagaagccacagccaggccccccttctgtgtttacagagatc
aagaatgccctgtggtcctcaagcatcgacaagttgcacctactcaagcctatctcaggc
agctcatcccgcactgatcccaactctgccaacagcaacgccaacaaggctggccattgc
aaggactgctcttgcaagtgtggtgagattcaggatgaagatctggcagctctgcgcgct
ggaaagcctgttcgcaagcagttccacgtggatggcagccggatgctcatcacccccaac
ggagactgcatccgtggtcttacccctgaagaggaggatgctttccttgagctccaggct
gctatcgccgctacagcggagaacccaggagccttcatcgctcctcgacatcagccagga
agcggcgccttttctctgatcaagggccgagccgttcccaacggtcgacccaacattttc
cctgccaccgctcaacctcagtcgcaggatcctattgggaagcttcaacgtgaggatgcg
ctcagctacatcaaccagtacgtcctccctcgcctcaacctaggggccaccaacatggga
ttccctaagggggcatctcctaccaaggacgcggctgctgcgagcctcaactctctggcg
ccctacttctacgggcctgatgctgctgctggcgttggcatctacacaccacctgatgga
gcccgagcgatgcaagactttagctcggccggtatgtcgagcgaggagcgtggcaagaac
tttggcatgggtgttagtggcatgcccctgatgagcgtcgaggatgctgagggcgccctt
gcggctgctcgtcgtgagacggagaagctggagaagggactgaaccaagtcatccgacgt
aacaggcggctgcttcttggaaacagcaactga
DBGET
integrated database retrieval system
