Nitrosococcus halophilus: Nhal_0456
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Entry
Nhal_0456 CDS
T01198
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nhal_0456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_0456
Enzymes [BR:
nhl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Nhal_0456
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Nhal_0456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
P2_Phage_GpR
Motif
Other DBs
NCBI-ProteinID:
ADE13642
UniProt:
D5BVL4
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All DBs
Position
469293..470066
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AA seq
257 aa
AA seq
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MPKLKIATWNVNSLRVRLPQVMDWLEAHQPDILALQETKLSDGEFPQEAFGDMGYRAAYS
GQKTYNGVAILCRQEPQDIMTDLPNLEDPQRRILGISLGDIRLLNLYVPNGSEVGSEKYA
YKLDWLARVKDYLQEALAEYPKLIVLGDFNVAPGDGDVHNPEIWHETILCSTPEREALGE
ILDLGFQDSFRLFEQEGQSFSWWDYRGGAFRRNWGLRIDLILISKELVPKCTECVIDKEP
RRLKRPSDHAPVIATFA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagctgaaaattgccacctggaatgtcaactccttgcgggtgcggctgccccag
gtgatggattggctagaggctcaccagcccgatattttggcgctgcaggaaacaaaactg
agtgatggcgaatttccccaggaggcgtttggggatatgggttatcgggcagcgtattcg
ggccagaaaacctataatggggtcgctatcctttgccgccaagaaccccaggatatcatg
accgatctccctaatttggaagatccccagcggcgtattctgggaattagcctgggtgat
attcgcttgctgaatctctatgttcccaacggcagtgaagtgggatcagaaaaatatgcc
tataagttagactggttggcgcgggtaaaagactatttacaggaggctttggctgagtat
cctaagctcattgtcttgggtgattttaacgtggccccaggggacggggatgtccataat
cctgaaatctggcacgagactattctgtgtagtactccagagcgggaagcattaggggaa
attctcgatttagggttccaggatagctttcgtttgtttgagcaggaagggcaatccttt
agttggtgggattatcgaggaggggcttttcgccgaaattggggattgcgtattgatctg
attttaattagcaaagagttagtgccaaagtgtacagagtgcgttattgataaagaaccc
cgccgtttaaagcgcccctctgatcatgccccggtcatcgcaacttttgcttaa
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