KEGG   Novosphingobium humi: PQ457_06190
Entry
PQ457_06190       CDS       T08806                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K19641  two-component system, NtrC family, response regulator HupR/HoxA
Organism
nhum  Novosphingobium humi
Pathway
nhum02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nhum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PQ457_06190
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nhum02022]
    PQ457_06190
Two-component system [BR:nhum02022]
 NtrC family
  HupT-HupR (hydrogenase synthesis regulation)
   PQ457_06190
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA HTH_30 HTH_50
Other DBs
NCBI-ProteinID: WCT78549
LinkDB
Position
1353075..1354565
AA seq 496 aa
MTQSALPTILIVDDEIRSLESLRRILEDEFEILTASSTREAEEMLSQHWVQVILCDQRMP
ERSGVEFLTLVKERWPDVIRMIISGYADAHDIIDGINQAGIFQYVTKPWHPDHLLLTLHS
ACRLFQLQRENELLAVELRMAPKAASAVVDKRKAQVRRAYDFNDGIVRAAGSPMDDVCGA
LAQVAPFDVPVLLIGSSGTGKELAARALHYGSLRWNKAFVVENCGALPDELLESELFGHK
KGAFTGAIDDHIGLFERADGGTVFLDEIGEVSPAFQVKLLRVLQEGEIRPLGHGRTRKVD
VRIIAATNRDLEQEMREGRFRADLFYRLAGMIVRLPDLKDRPGDLPVLVQTLLDRAMGSM
GKRVQGVSDEAMARLSAYGWPGNVRELQNEIQRMLVRGVEGRWLGVDVLSPHIAAPARPL
AEEPVETMAGLGDLTGDLKERVCAMEARIIRETLIRHRWNKSQAARELGLSRVGLRAKLE
RYGLENVHPLRGAVGR
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgacgcaatccgccctgccaaccatcctgatcgtcgatgacgagatccgcagccttgaa
tccctgcgccgcattctggaggatgagttcgagatcctgacggcctcctcgacgcgcgag
gccgaggagatgctgtcccaacattgggtgcaggtgatcctgtgcgaccagcgcatgccc
gagcgcagcggggtggaattcctgacgctggtcaaggagcgctggcccgatgtgatccgc
atgatcatttcgggctatgccgatgcgcatgacattatcgacgggatcaatcaggcgggc
attttccaatatgtgaccaagccctggcatcccgaccatctgctgctgacgctgcattcg
gcctgccgcctgtttcagcttcagcgggaaaacgaattgctggcggttgaattgcgcatg
gcccccaaggccgccagcgcggtggtggacaagcgcaaggcgcaggtgcgccgagcctat
gatttcaacgacggcatcgtgcgcgcggcgggcagcccgatggatgacgtttgcggcgcg
ctggcgcaggtggcgccctttgacgtgccggtgctgctgatcggctcgtcgggcacgggc
aaggaactggcggcgcgggctttgcattatggctcgctgcgctggaacaaggcgtttgtg
gtggaaaattgcggcgccttgcccgacgaattgctggaaagcgaattgttcggccataaa
aagggcgccttcaccggggcgatcgacgaccatatcggcctgttcgaacgcgccgacggc
ggcacggtgttcctcgacgaaatcggcgaggtcagccccgcctttcaggtcaaattgctg
cgcgttttgcaggaaggcgagatccgcccgctgggccatgggcgcacgcgcaaggtggat
gtgcgcattatcgcggccaccaaccgcgatcttgaacaggaaatgcgcgagggtcggttc
cgcgccgatctgttctatcgccttgcgggcatgatcgtgcgcctgcccgatctgaaggac
cgccccggcgatctgcccgtgctggtgcagaccctgctggaccgcgcgatgggcagcatg
ggcaagcgggtgcagggcgtttccgacgaggcgatggcgcgcctgtcggcctatggctgg
ccgggcaatgtgcgcgagcttcagaatgagatccagcgcatgctggtgcgcggggtggag
gggcgctggctgggggtggatgtgctttcgccccatattgccgcgcccgcgcgccctttg
gccgaggagccggttgagaccatggccggtctgggcgacctgacgggggatctcaaggaa
cgcgtctgcgcgatggaggcgcggatcatccgcgaaacgctgatccgccaccgttggaac
aaatcgcaggcggcgcgtgaactgggcctctcgcgcgtggggctgcgggcgaaacttgaa
cgttatgggctggagaatgtccacccgctgcgtggggctgtcggccgatga

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