Novosphingobium humi: PQ457_15785
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Entry
PQ457_15785 CDS
T08806
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nhum
Novosphingobium humi
Pathway
nhum00521
Streptomycin biosynthesis
nhum00523
Polyketide sugar unit biosynthesis
nhum00541
O-Antigen nucleotide sugar biosynthesis
nhum01100
Metabolic pathways
nhum01110
Biosynthesis of secondary metabolites
nhum01250
Biosynthesis of nucleotide sugars
Module
nhum_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PQ457_15785 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PQ457_15785 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PQ457_15785 (rfbC)
Enzymes [BR:
nhum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PQ457_15785 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WCT77355
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All DBs
Position
complement(3369966..3370529)
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AA seq
187 aa
AA seq
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MECKTFDIAGPVEIIPRKLGDERGYFTELFREDRFAPLAGPIRFVQENQSLSARVGTIRG
LHFQTHPMGQGKLVRCAAGAILDVAVDIRHDSPTFGQWIAVELTAEKCNQLWVPVGFAHG
FCTLRPDTIVTYRVTNYYSPAHDKGMAWNDPAVGIVWPDMADAETLSGKDRVQPLLADLP
HYFSVKD
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaatgcaaaactttcgatattgccggtccggtcgaaatcatcccgcgcaagctgggg
gatgaacggggctattttacggaattgttccgcgaggatcggtttgcgccgctggctggg
ccgatccggtttgttcaggagaaccagtcgctatcggcgcgggtggggaccattcgcggg
ctgcattttcaaacgcatcccatgggacagggcaagctggtgcgctgcgcagcgggcgcg
attctggatgtggcagtcgatattcgccatgattccccgacatttggccaatggatcgcg
gtcgagctgacggcggaaaaatgcaaccagctttgggtgcccgtcggctttgcccatggg
ttttgcactttgcggcccgacacgatcgtcacctatcgcgtgaccaactattacagcccg
gcgcatgacaagggcatggcgtggaacgatccggcggtgggaatcgtctggcccgatatg
gccgatgccgaaacgctgtcaggcaaggatcgggtgcagccgctgctggccgatctgccg
cattattttagcgtaaaggactga
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